Browse where type is Software and year is 2024
Number of items: 68.
A
Additional file 2 of Unsupervised title and abstract screening for systematic review: a retrospective case-study using topic modelling methodology. (2024)
Natukunda, Agnes, Muchene, Leacky K.
A comparison of covariate adjustment approaches under model misspecification in individually randomized trials. (2024)
Tackney, Mia S., Morris, Tim, White, Ian, Leyrat, Clemence, Diaz-Ordaz, Karla, Williamson, Elizabeth
alxsrobert/measles_england_sir. (2024)
Robert, Alexis, Suffel, Anne Marie
APHRC-DSE/INSPIRE-Mental-Health-Project_Landscape_Analysis: R Source code. (2024)
Momanyi, Reinpeter Ondeyo, Mugotitsa, Bylhah
AndriaMousa/chemoprevention-trial-code. (2024)
Mousa, Andria
amrnet/amrnet: AMRnet-v1.0. (2024)
Cerdeira, Louise, Sharma, Vandana, Maranga, Mary, Carey, Megan, Dyson, Zoe Anne, Holt, Kathryn E.
ATLopezJimenez/Toolset-high-content-analysis-of-Shigella-infection. (2024)
López-jiménez, Ana Teresa
C
ciarajudge/EpiFusion. (2024)
Judge, Ciara
ciarajudge/EpiFusion_PublicationRepo. (2024)
Judge, Ciara
cleanepi: Clean and Standardize Epidemiological Data. (2024)
Mané, Karim, Jombart, Thibaut, Bah, Bubacarr, Ahadzie, Bankolé, Mohammed, Nuredin, Degoot, Abdoelnaser M., Gruson, Hugo, Gupte, Pratik R., Azam, James M., Lambert, Joshua W., Hartgerink, Chris
cfr: Estimate Disease Severity and Case Ascertainment. (2024)
Gupte, Pratik R., Kucharski, Adam J., Russell, Timothy W., Lambert, Joshua W., Gruson, Hugo, Taylor, Tim, Azam, James M., Degoot, Abdoelnaser M., Funk, Sebastian
D
dzvoti/r4hces. (2024)
dzvoti, Segovia De La Revilla, Lucia, Codd, Tom
DAISIEmainland. (2024)
Lambert, Joshua W., Bilderbeek, Richèl, Santos Neves, Pedro
Dataset: NECTAR2 Randomized Controlled Trial. (2024)
Drakeley, Chris, Dicko, Alassane, Bousema, Teun
dchodge/rsvmabmat. (2024)
Hodgson, David
E
enilles1/DR-Leptospirosis. (2024)
Nilles, Eric J., Rees, Eleanor
epiparameterDB: Database of Epidemiological Parameters. (2024)
Lambert, Joshua W., Kucharski, Adam J., Tamayo, Carmen
epichains: Simulating and Analysing Transmission Chain Statistics Using Branching Process Models. (2024)
Azam, James M., Funk, Sebastian, Finger, Flavio, Kamvar, Zhian N., Gruson, Hugo, Mané, Karim, Gupte, Pratik, Lambert, Joshua W.
esnightingale/vl-disaggregation. (2024)
Nightingale, Emily
EpiNow2: Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters. (2024)
Abbott, Sam, Hellewell, Joel, Sherratt, Katharine, Gostic, Katelyn, Hickson, Joe, Badr, Hamada S., DeWitt, Michael, Azam, James M., EpiForecasts, Funk, Sebastian
emilycfivian/Intersectionality-in-NSA-interventions-Analytical-code. (2024)
Fivian, Emily
epiverse-trace/serofoi. (2024)
Domínguez, Nicolás Torres, Gruson, Hugo, Pavlich-Mariscal, Jaime, Gomez, Geraldine, Gámez López, Miguel Enrique, Cucunubá, Zulma M., tracelac, Hartgerink, Chris, Azam, James, ben18785
ehm-lab/hipmapp: Health Impact Projections Shiny App and Data. (2024)
De la cruz Libardi, Arturo
epiforecasts/multi-model-information: Publication release. (2024)
Sherratt, Katharine, Funk, Sebastian
ehr-lshtm/code-sharing: published_article. (2024)
Schultze, Anna, Tazare, John
emmahodcroft/ncov_2021: Release for Geneva Manuscript. (2024)
Hodcroft, Emma, Zuber, Moira, Harkins, Elias, Neher, Richard, Wagner, Cassia, Huddleston, John, Bedford, Trevor, Moncla, Louise H, Hadfield, James, fzhang12, Sibley, Thomas, Saleh, Ahmad, falnaji, Xueying, aniafijarczyk, Nezu, Tomoyuki, Müller, Nicola Felix, Gall, Astrid, Brito, Anderson, Villabona Arenas, Ch. Julian, Bell, Sidney, Kozyreva, Varvara, Eren, Puller, Vadim, Han, Alvin X., irak, Rimaz, Hossein, Ghafari, Mahan, Sato, Takeshi, Lee, Hanbin
epiverse-trace/simulist. (2024)
Lambert, Joshua, Gruson, Hugo, Kucharski, Adam J., Tamayo Cuartero, Carmen
F
fkrauer/RSV-VACC-DE. (2024)
Krauer, Fabienne
finalsize: Calculate the Final Size of an Epidemic. (2024)
Gupte, Pratik, Van Leeuwen, Edwin, Kucharski, Adam, Eggo, Rosalind M., Gruson, Hugo, Jombart, Thibaut, Valle Campos, Andree, Lambert, Joshua W.
G
ghr/wnv_casecrossover. (2024)
Moirano, Giovenale, Fletcher, Chloe, Semenza, Jan C., Lowe, Rachel
gasparrini/UK-HWfcast. (2024)
Mistry, Malcolm, Gasparrini, Antonio
gwenknight/ecdc_data_age_sex. (2024)
Waterlow, Naomi, Knight, Gwen
K
klebgenomics/Kleborate: v3.0.0. (2024)
Ryan Wick, Holt, Kathryn E., marlam89, kelwyres, Maranga, Mary, Petit III, Robert A., da Silva, Anders Goncalves, Deveaud, Eric, Lampa, Samuel, Stanton, Tom
L
LuciaSegovia/FAO-fisheries. (2024)
Segovia De La Revilla, Lucia, dzvoti, Codd, Tom
lshtm-tbmg/tbmod-pub-undernutrition. (2024)
Clark, Rebecca
LSHTMPathogenSeqLab/malaria-hub. (2024)
juuzia, Ngwana-Joseph, Gabrielle
lshtm-vimc/prime. (2024)
Abbas, Kaja M., Vaccine Impact, Hadley, Liza
lucy-gf/imd-covid. (2024)
Goodfellow, Lucy
N
nicolacfoster/dcea.ana: ASCENT DCEA. (2024)
Foster, Nicola
nextstrain/nextclade. (2024)
Aksamentov, Ivan, Neher, Richard, Roemer, Cornelius, mt-gitlocalize, Parker, Anna Anya, Lin, Victor, Sibley, Thomas, Negrón, Daniel Antonio, Nextstrain bot, Anderson, John SJ, Snyk bot, Hodcroft, Emma, Actat, Rubinsteyn, Alex, Grüning, Björn, Tegomoh, Bryan, Chen, Chaoran, Bottoms, Christopher, Maguire, Finlay, Huddleston, John, Lee, Jover, Sanderson, Theo, Harkins, Elias
numberize: Convert Words to Numbers in Multiple Languages. (2024)
Hartgerink, Chris, Lambert, Joshua W., Mané, Karim, Gruson, Hugo, Ahadzie, Bankole
R
rachaelpung/temporal_networks. (2024)
Pung, Rachael, Kucharski, Adam J., Firth, Josh, Russell, Timothy W., Rogers, Tim, Lee, Vernon
R markdown for: "Estimating Food Consumption, Micronutrient Intake, and the Contribution of Large-Scale Food Fortification to Micronutrient Adequacy in Tanzania". (2024)
Goto, Rie
folder_zip
ruwanepi/Uvira_spatiotemporal. (2024)
Ratnayake, Ruwan
S
supingling/spc. (2024)
Ling, Suping
Synthetic datasets for: "Long-term exposure to PM2.5 and mortality: an analysis of the UK Biobank". (2024)
Gasparrini, Antonio, Vanoli, Jacopo
SLGiHub/FIEBRE_Adult_severity_scores: FIEBRE Adult Severity Scores. (2024)
SLGiHub
sophiemoss/anopheles_popgen. (2024)
Moss, Sophie
supingling/colorectal_cancer. (2024)
Ling, Suping
Supplementary material for "Mapping the evidence of novel plant-based foods: A systematic review of nutritional, health, and environmental impacts in high-income countries". (2024)
Nájera Espinosa, Sarah, Hadida, Genevieve, Jelmar Sietsma, Anne, Alae-Carew, Carmelia, Turner, Grace, Green, Rosemary, Picetti, Roberto, Pastorino, Silvia, Scheelbeek, Pauline
shaunkeegan/coinfection_spatial_scaling_paper. (2024)
Keegan, Shaun, Fenton, Andy
T
theosanderson/taxonium. (2024)
Sanderson, Theo, Kramer, Alex, Goater, Richard, Hinrichs, Angie, L'YI, Sehi, Roemer, Cornelius, Kwon, Sung, Vargha, Koorous
typhoidgenomics/genotyphi. (2024)
Holt, Kathryn E., Dyson, Zoe Anne, Hawkey, Jane, flashton2003
thimotei/legacy_nAb_kinetics. (2024)
Russell, Timothy W., Kucharski, Adam J.
theosanderson/hospitalmedicines. (2024)
Sanderson, Theodore