LSHTM Organisational Structure (3712)

Faculty of Epidemiology and Population Health (2419)

Dept of Infectious Disease Epidemiology (-2023) (826) Data Creators(s) Title Item Type No Grouping

A

Awareness and uptake of layered HIV prevention programming for young women: analysis of population-based surveys in three DREAMS settings in Kenya and South Africa. (2019) Gourlay, Annabelle, Birdthistle, Isolde, Mthiyane, Nondumiso Thandiwe, Orindi, Benedict O., Muuo, Sheru, Kwaro, Daniel, Shahmanesh, Maryam, Baisley, Kathy, Ziraba, Abdhalah, Floyd, Sian

Acceptability and sensory qualities of fortified rice in Nepal. (2019) Homolka, Susanne, Zallet, Julia, Albert, Heidi, Witt, Anne-Kathrin, Kranzer, Katharina

AR.IA App drug breakdown (groups). (2019) Leclerc, Quentin J., Naylor, Nichola R., Aiken, Alexander M., Coll, Francesc, Knight, Gwenan M.

AR.IA App species breakdown. (2019) Leclerc, Quentin J., Naylor, Nichola R., Aiken, Alexander M., Coll, Francesc, Knight, Gwenan M.

Additional file 2: of Estimating the burden of dengue and the impact of release of wMel Wolbachia-infected mosquitoes in Indonesia: a modelling study. (2019) O'reilly, Kathleen, Hendrickx, Emilie, Kharisma, Dinar D., Wilastonegoro, Nandyan N., Carrington, Lauren B., Elyazar, Iqbal R. F., Kucharsk, Adam J., Lowe, Rachel, Flasche, Stefan, Pigott, David M., Reiner Jr, Robert C., Edmunds, John, Hay, Simon I., Yakob, Laith, Shepard, Donald S., Brady, Oliver

Additional file 1: of Mapping the medical outcomes study HIV health survey (MOS-HIV) to the EuroQoL 5 Dimension (EQ-5D-3 L) utility index. (2019) Shi, Yuan, Thompson, Jennifer, Walker, A Sarah, Paton, Nicholas, Cheung, Yin Bun

C

Code for simulating release of Wolbachia mosquitoes in Indonesia and assessing their cost effectiveness in different places over time. (2019) Brady, Oliver J., Bastos, Leonardo

Characterizing herpes simplex virus type 1 and type 2 seroprevalence declines and epidemiological association in the United States. (2019) Chemaitelly, Hiam, Nagelkerke, Nico, Omori, Ryosuke, Abu-Raddad, Laith J

Closing the immunisation gap in Ethiopia: a formative evaluation of 'The Fifth Child Project'. (2019) Demissie, Shiferaw Dechasa, Larson, Heidi, Chantler, Tracey, Kozuki, Naoko, Karafillakis, Emilie, Landegger, Justine, Kiapi, Lilian, Gebrekirstos, Petros, Mohammad, Sira, Wodajo, Samuel, Langston, Anne

Community-based distribution of oral HIV self-testing kits: experimental evidence from Zambia. (2019) Hensen, Bernadette, Ayles, Helen, Mulubwa, Chama, Floyd, Sian, Schaap, Ab, Chiti, Bwalya, Phiri, Mwelwa, Mwenge, Lawrence, Simwinga, Musonda, Fidler, Sarah, Hayes, Richard, Bond, Virginia, Mwinga, Alwin

Contrasting impact of rural, versus urban, living on glucose metabolism and blood pressure in Uganda. (2019) Sanya, Richard, Webb, Emily html

D

Dataset for "Involving male partners in maternity care in Burkina Faso: a randomized controlled trial". (2019) Daniele, Marina, Ouedraogo, Djeneba, Some, Henri, Ganaba, Rasmané, Sarrassat, Sophie, Cousens, Simon, Rossier, Clementine, Filippi, Veronique html

Data for "Where are patients missed in the tuberculosis diagnostic cascade? A prospective cohort study in Ghana". (2019) Der, Joyce, Grint, Daniel, Narh, Clement T., Bonsu, Frank, Grant, Alison D. description

Denvaxia-in-Phillippines. (2019) Flasche, Stefan

De-identified clinical survey data in SPSS. (2019) Haque, Farhana, Rahman, Mahmudur, Banu, Nuzhat Nasreen, Sharif, Ahmad Raihan, Jubayer, Shamim, Shamsuzzaman, AKM, Alamgir, ASM, Erasmus, Jesse H, Guzman, Hilda, Forrester, Naomi, Luby, Stephen P, Gurley, Emily S

De-identified symptom duration data in SPSS. (2019) Haque, Farhana, Rahman, Mahmudur, Banu, Nuzhat Nasreen, Sharif, Ahmad Raihan, Jubayer, Shamim, Shamsuzzaman, AKM, Alamgir, ASM, Erasmus, Jesse H, Guzman, Hilda, Forrester, Naomi, Luby, Stephen P, Gurley, Emily S

Data from: Analysis-ready datasets for insecticide resistance phenotype and genotype frequency in African malaria vectors. (2019) Moyes, Catherine L., Wiebe, Antoinette, Gleave, Katherine, Trett, Anna, Hancock, Penelope A., Padonou, Germain Gil, Chouaïbou, Mouhamadou S., Sovi, Arthur, Abuelmaali, Sara A., Ochomo, Eric, Antonio-Nkondjio, Christophe, Dengela, Dereje, Kawada, Hitoshi, Dabire, Roch K., Donnelly, Martin J., Mbogo, Charles, Fornadel, Christen, Coleman, Michael

Data for: "Seasonal Malaria Chemoprevention combined with Community Case Management of malaria in children under 10 years of age, over 5 months, in southern Senegal: a cluster-randomized trial". (2019) NDiaye, Jean Louis, Milligan, Paul folder_zip

denvax: Simple Dengue Test and Vaccinate Cost Thresholds. (2019) Pearson, Carl, Abbas, Kaja M., Clifford, Samuel, Flasche, Stefan, Hladish, Thomas J.

Data from: The temporal dynamics and infectiousness of subpatent Plasmodium falciparum infections in relation to parasite density. (2019) Slater, Hannah C., Ross, Amanda, Felger, Ingrid, Hofmann, Natalie E., Robinson, Leanne, Cook, Jackie, Gonçalves, Bronner P., Björkman, Anders, Ouedraogo, Andre Lin, Morris, Ulrika, Msellem, Mwinyi, Koepfli, Cristian, Mueller, Ivo, Tadesse, Fitsum, Gadisa, Endalamaw, Domingo, Gonzalo, Kapulu, Melissa, Midega, Janet, Owusu-Agyei, Seth, Nabet, Cécile, Piarroux, Renaud, Doumbo, Ogobara, Doumbo, Safiatou Niare, Koram, Kwadwo, Lucchi, Naomi, Udhayakumar, Venkatachalam, Mosha, Jacklin, Tiono, Alfred, Chandramohan, Daniel, Gosling, Roly, Mwingira, Felista, Sauerwein, Robert, Riley, Eleanor M., White, Nicholas J., Nosten, Francois, Imwong, Mallika, Bousema, Teun, Drakeley, Chris, Okell, Lucy C.

E

EXTENDED DATA [The conjunctival transcriptome in Ethiopians after trichiasis surgery: associations with the development of eyelid contour abnormalities and the effect of oral doxycycline treatment]. (2019) Derrick, Tamsyn

Ebola Contact Tracing Study data. (2019) Weiss, Helen, Danquah, Lisa, Hasham, Nadia, MacFarlane, Matthew

G

gwenknight/empiricprescribing. (2019) Knight, Gwen

H

Health service provision for and utilisation by young people (10-24 years) study conducted between September 2016 and August 2017 within the Africa Health Research Institute’s Population Intervention Programme Surveillance Area in northern KwaZulu-Natal. (2019) Doyle, Aoife M., Seeley, Janet

I

Incidence of tuberculosis infection among adolescents in rural KwaZulu-Natal, South Africa, 2017-2018. (2019) Grant, Alison D., Baisley, Kathy, Mzembe, Themba, Edwards, Anita

J

jstockwin/EpiEstimApp: v1.0.0. (2019) Stockwin, Jake, Thompson, Robin, Cori, Anne, Jombart, Thibaut, Kamvar, Zhian N., FitzJohn, Rich

K

Kilifi Malaria Longitudinal Cohort cross-sectional survey and weekly-follow-up surveillance data for the estimation of parasite prevalence and factors associated with gametocyte carriage. (2019) Muthui, Michelle K., Mogeni, Polycarp, Mwai, Kennedy, Nyundo, Christopher, Macharia, Alex, Williams, Thomas N., Nyangweso, George, Wambua, Juliana, Mwanga, Daniel, Marsh, Kevin, Bejon, Philip, Kapulu, Melissa C.

M

mrc-ide/EpiEstim: 2.2-3. (2019) Cori, Anne, Kamvar, Zhian N., Stockwin, Jake, Jombart, Thibaut, Thompson, Robin, Dahlqwist, Elisabeth

Mid-upper arm circumference predicts death in adult patients admitted to a TB ward in the Philippines: A prospective cohort study. (2019) Mota, Joao Felipe, Lee, Nathaniel, White, Laura V., Marin, Flora P., Saludar, Naomi R., Solante, Marietta B., Tactacan-Abrenica, Rosario J. C., Calapis, Rugaiya W., Suzuki, Motoi, Saito, Nobuo, Ariyoshi, Koya, Parry, Christopher M., Edwards, Tansy, Cox, Sharon E.

O

obrady/Wolbachia_CE. (2019) Brady, Oliver J., Bastos, Leonardo

Occurrence point data from: "The current and future global distribution and population at risk of dengue". (2019) Messina, Jane P, Brady, Oliver J, Golding, Nick, Kraemer, Moritz UG, Wint, G R William, Ray, Sarah E, Pigott, David M, Shearer, Freya M, Johnson, Kimberly, Earl, Lucas, Marczak, Laurie B, Shirude, Shreya, Davis Weaver, Nicole, Gilbert, Marius, Velayudhan, Raman, Jones, Peter, Jaenisch, Thomas, Scott, Thomas W, Reiner Jr, Robert C, Hay, Simon I

P

Productivity, family planning and reproductive health in Burkina Faso 2013-2014. (2019) Filippi, Veronique, Cresswell, Jenny, Yaogo, M, Ganaba, R, Powell-jackson, Timothy, Soubeiga, A, Drabo, S, Storeng, Katerini, Ilboudo, P, Ouedraogo, D, Some, H

Q

Qualitative data for: "The landscape of validation of global maternal and newborn health indicators through key informant interviews". (2019) Benova, Lenka, Moller, A, Moran, A. C.

R

Replication Data for: Congenital Microcephaly Unrelated to Flavivirus Exposure in Coastal Kenya. (2019) Barsosio, Hellen C., Gitonga, John N., Karanja, Henry Kibe, Nyamwaya, Doris K., Omuoyo, Donwilliams O., Kamau, Everlyn, Hamaluba, Mainga M., Nyiro, Joyce U., Kitsao, Barnes S., Nyaguara, Amek, Mwakio, Stella, Newton, Charles R., Sang, Rosemary, Wright, Daniel, Sanders, Eduard J., Seale, Anna C., Agoti, Charles N., Berkley, James A., Bejon, Philip, Warimwe, George M.

Real-time analysis of the diphtheria outbreak in forcibly displaced Myanmar nationals in Bangladesh. (2019) Finger, Flavio, Funk, Sebastian, White, Kate, Siddiqui, M. Ruby, Edmunds, W. John, Kucharski, Adam J.

R Code accompanying the manuscript "Assessing the performance of real-time epidemic forecasts: A case study of Ebola in the Western Area region of Sierra Leone, 2014-15". (2019) Funk, Sebastian

Replication Data for: Impact of the introduction of rotavirus vaccine on hospital admissions for diarrhoea among children in Kenya: A controlled interrupted time series analysis. (2019) Otieno, Grieven P., Bottomley, Christian, Khagayi, Sammy, Ogwel, Billy, Nokes, D. James

S

seabbs/AssessBCGPolicyChange. (2019) Abbott, Sam

seabbs/EstZoonoticTB. (2019) Abbott, Sam

seabbs/ModelTBBCGEngland. (2019) Abbott, Sam

seabbs/SpeedyMarkov. (2019) Abbott, Sam

Supporting information for National, regional, and worldwide estimates of low birthweight rates in 2015, with trends from 2000: a systematic analysis. (2019) Blencowe, Hannah, Krasevec, Julia, de Onis, Mercedes, Black, Robert E., An, Xiaoyi, Stevens, Gretchen A., Borghi, Elaine, Hayashi, Chika, Estevez, Diana, Cegolon, Luca, Shiekh, Suhail, Ponce Hardy, Victoria, Lawn, Joy E., Cousens, Simon

Social contact data for Zambia and South Africa (CODA dataset). (2019) Dodd, Peter J, Looker, Clare, Plumb, Ian D., Bond, Virginia, Schaap, Ab, Shanaube, Kwame, Muyoyeta, Monde, Vynnycky, Emilia, Godfrey-faussett, Peter, Corbett, Elizabeth L., Beyers, Nulda, Ayles, Helen, White, Richard G.

sbfnk/epimixr. (2019) Funk, Sebastian

Syndromic survey de-identified data in SPSS. (2019) Haque, Farhana, Rahman, Mahmudur, Banu, Nuzhat Nasreen, Sharif, Ahmad Raihan, Jubayer, Shamim, Shamsuzzaman, AKM, Alamgir, ASM, Erasmus, Jesse H., Guzman, Hilda, Forrester, Naomi, Luby, Stephen P., Gurley, Emily S.

Supportive supervision of close-to-community providers of health care: Findings from action research conducted in two counties in Kenya. (2019) Karuga, Robinson Njoroge, Mireku, Maryline, Muturi, Nelly, McCollum, Rosalind, Vallieres, Frederique, Kumar, Meghan, Taegtmeyer, Miriam, Otiso, Lilian

Summary table of the elements recorded in the 43 studies included in our review from Mathematical modelling to study the horizontal transfer of antimicrobial resistance genes in bacteria: current state of the field and recommendations. (2019) Leclerc, Quentin J., Lindsay, Jodi A., Knight, Gwenan M.

Spatial and temporal development of deltamethrin resistance in malaria vectors of the Anopheles gambiae complex from North Cameroon. (2019) Mandeng, Stanislas Elysée, Awono-Ambene, Herman Parfait, Bigoga, Jude D, Ekoko, Wolfgang Eyisap, Binyang, Jérome, Piameu, Michael, Mbakop, Lili Ranaise, Fesuh, Betrand Nono, Mvondo, Narcisse, Tabue, Raymond, Nwane, Philippe, Mimpfoundi, Rémy, Toto, Jean Claude, Kleinschmidt, Immo, Knox, Tessa Bellamy, Mnzava, Abraham Peter, Donnelly, Martin James, Fondjo, Etienne, Etang, Josiane

SONA project - Asthma management data. (2019) Webb, Emily, Mpairwe, Harriet description

Social contact data for China mainland. (2019) Zhang, Juanjuan, Klepac, Petra, Read, Jonathan, Rosello, Alicia, Wang, Xiling, Lai, Shengjie, Li, Meng, Song, Yujian, Wei, Qingzhen, Jiang, Hao, Yang, Juan, Lynn, Henry, Flasche, Stefan, Jit, Mark, Yu, Hongjie

T

The management of microbial keratitis within Uganda’s primary health system: a situational analysis. (2019) Arunga, Simon

Table 1 - Fueling Open Innovation for Malaria Transmission-Blocking Drugs: Hundreds of Molecules Targeting Early Parasite Mosquito Stages. (2019) Delves, Michael, Lafuente-Monasterio, M. Jose, Upton, Leanna, Ruecker, Andrea, Leroy, Didier, Gamo, Francisco-Javier, Sinden, Robert

TB Fast Track dataset. (2019) Fielding, Katherine folder_zip

Time to acute kidney injury and its predictors among newly diagnosed Type 2 diabetic patients at government hospitals in Harari Region, East Ethiopia. S1 Data. (2019) Regassa, Lemma Demissie, Gete, Yigzaw Kebede, Mekonnen, Fantahun Ayenew

V

Voluntary medical male circumcision uptake through soccer in Zimbabwe. (2019) DeCelles, Jeff, Kaufman, Zak, Bhauti, Kenneth, Hershow, Rebecca, Weiss, Helen, Chaibva, Cynthia, Moyo, Netsai, Braunschweig, Elise, Mantula, Fennie, Hatzold, Karin, Ross, David