Date Title Item Type No Grouping

9

99% credible set SNPs for leprosy association at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

A

Additional file 3 of Pre-pregnancy gene expression signatures are associated with subsequent improvement/worsening of rheumatoid arthritis during pregnancy. (2024) Wright, Matthew, Smed, Mette Kiel, Nelson, J. Lee, Olsen, Jørn, Hetland, Merete Lund, Jewell, Nicholas P., Zoffmann, Vibeke, Jawaheer, Damini

Additional file 4 of Characterisation of ethnic differences in DNA methylation between UK-resident South Asians and Europeans. (2022) Elliott, Hannah R., Burrows, Kimberley, Min, Josine L., Tillin, Therese, Mason, Dan, Wright, John, Santorelli, Gillian, Davey Smith, George, Lawlor, Deborah A., Hughes, Alun D., Chaturvedi, Nishi, Relton, Caroline L.

Analysis of pleiotropy at the leprosy association at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Association statistics for imputed classical HLA alleles and leprosy risk in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Additional file 1 of Safety of beta-blocker and calcium channel blocker antihypertensive drugs in pregnancy: a Mendelian randomization study. (2022) Ardissino, Maddalena, Slob, Eric A. W., Rajasundaram, Skanda, Reddy, Rohin K., Woolf, Benjamin, Girling, Joanna, Johnson, Mark R., Ng, Fu Siong, Gill, Dipender

APCDR Uganda GWAS: Genome-wide sequence variation and susceptibility loci for cardiometabolic traits in a sub-Saharan African population (UGWAS component). (2022) Uganda Medical Informatics Centre

Additional file 3 of DNA methylome-wide association study of genetic risk for depression implicates antigen processing and immune responses. (2022) Shen, Xueyi, Caramaschi, Doretta, Adams, Mark J., Walker, Rosie M., Min, Josine L., Kwong, Alex, Hemani, Gibran, Barbu, Miruna C., Whalley, Heather C., Harris, Sarah E., Deary, Ian J., Morris, Stewart W., Cox, Simon R., Relton, Caroline L., Marioni, Riccardo E., Evans, Kathryn L., McIntosh, Andrew M.

Additional file 4 of Epigenetic modelling of former, current and never smokers. (2021) Langdon, Ryan J, Yousefi, Paul, Relton, Caroline L, Suderman, Matthew J

Additional file 1 of GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning. (2021) Gröschel, Matthias I., Owens, Martin, Freschi, Luca, Vargas, Roger, Marin, Maximilian G., Phelan, Jody, Iqbal, Zamin, Dixit, Avika, Farhat, Maha R.

Additional file 2 of Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients. (2021) Wyres, Kelly L., Hawkey, Jane, Mirčeta, Mirianne, Judd, Louise M., Wick, Ryan R., Gorrie, Claire L., Pratt, Nigel F., Garlick, Jill S., Watson, Kerrie M., Pilcher, David V., McGloughlin, Steve A., Abbott, Iain J., Macesic, Nenad, Spelman, Denis W., Jenney, Adam W. J., Holt, Kathryn E.

Atypical Salmonella: Invasive atypical non-typhoidal Salmonella serovars in The Gambia. (2021) London School of Hygiene & Tropical Medicine

Anopheles stephensi mosquitoes as vectors of Plasmodium vivax and falciparum, Horn of Africa, 2019. (2021) Tadesse, Fitsum G., Ashine, Temesgen, Teka, Hiwot, Esayas, Endashaw, Messenger, Louisa A., Chali, Wakweya, Meerstein-Kessel, Lisette, Walker, Thomas, Wolde Behaksra, Sinknesh, Lanke, Kjerstin, Heutink, Roel, Jeffries, Claire L., Mekonnen, Daniel Abebe, Hailemeskel, Elifaged, Tebeje, Surafel K., Tafesse, Temesgen, Gashaw, Abrham, Tsegaye, Tizita, Emiru, Tadele, Kigozi, Simon, Bogale, Eyuel Asemahegn, Yohannes, Gedeon, Kedir, Soriya, Shumie, Girma, Sabir, Senya Asfer, Mumba, Peter, Dengela, Dereje, Kolaczinski, Jan H., Wilson, Anne, Churcher, Thomas S., Chibsa, Sheleme, Murphy, Matthew, Balkew, Meshesha, Irish, Seth, Drakeley, Chris, Gadisa, Endalamaw, Bousema, Teun

Additional file 3 of Childhood DNA methylation as a marker of early life rapid weight gain and subsequent overweight. (2021) Robinson, N., Brown, H., Antoun, Elie, Godfrey, Keith M., Hanson, Mark A., Lillycrop, Karen A., Crozier, Sarah R., Murray, Robert, Pearce, M. S., Relton, Caroline L., Albani, V., McKay, J. A.

A non enveloped arbovirus released in lysosome-derived extracellular vesicles induces super infection exclusion. (2020) Labadie, Thomas, Roy, Polly

Additional file 11 of Impact of industrial production system parameters on chicken microbiomes: mechanisms to improve performance and reduce Campylobacter. (2020) McKenna, Aaron, Ijaz, Umer Zeeshan, Kelly, Carmel, Linton, Mark, Sloan, William T., Green, Brian D., Lavery, Ursula, Dorrell, Nick, Wren, Brendan W., Richmond, Anne, Corcionivoschi, Nicolae, Gundogdu, Ozan

An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis. (2019) London School of Hygiene & Tropical Medicine

Analysis of Clostridium difficile Ribotype 023 strains reveals the recent emergence of a highly related virulent clade with unique characteristics. (2019) London School of Hygiene & Tropical Medicine

Additional file 2: of Estimating the burden of dengue and the impact of release of wMel Wolbachia-infected mosquitoes in Indonesia: a modelling study. (2019) O'reilly, Kathleen, Hendrickx, Emilie, Kharisma, Dinar D., Wilastonegoro, Nandyan N., Carrington, Lauren B., Elyazar, Iqbal R. F., Kucharsk, Adam J., Lowe, Rachel, Flasche, Stefan, Pigott, David M., Reiner Jr, Robert C., Edmunds, John, Hay, Simon I., Yakob, Laith, Shepard, Donald S., Brady, Oliver

arata-hidano/Molecular_simulation. (2019) Hidano, Arata, Gates, M. Carolyn

Additional file 1: of Integrating informatics tools and portable sequencing technology for rapid detection of resistance to anti-tuberculous drugs. (2019) Phelan, Jody, O’Sullivan, Denise M, Machado, Diana, Ramos, Jorge, Oppong, Yaa EA, Campino, Susana, O’Grady, Justin, McNerney, Ruth, Hibberd, Martin L, Viveiros, Miguel, Huggett, Jim F, Clark, Taane G.

Additional file 2 of: Performance of neural network basecalling tools for Oxford Nanopore sequencing. (2019) Wick, Ryan R, Judd, Louise M, Holt, Kathryn E.

Additional file 1: of A genomic atlas of systemic interindividual epigenetic variation in humans. (2019) Gunasekara, Chathura J, Scott, C. Anthony, Laritsky, Eleonora, Baker, Maria S, MacKay, Harry, Duryea, Jack D, Kessler, Noah J., Hellenthal, Hellenthal, Wood, Alexis C, Hodges, Kelly R, Gandhi, Manisha, Hair, Amy B, Silver, Matt, Moore, Sophie E, Prentice, Andrew M., Li, Yumei, Chen, Rui, Coarfa, Cristian, Waterland, Robert A

Additional file 1: of Mapping the medical outcomes study HIV health survey (MOS-HIV) to the EuroQoL 5 Dimension (EQ-5D-3 L) utility index. (2019) Shi, Yuan, Thompson, Jennifer, Walker, A Sarah, Paton, Nicholas, Cheung, Yin Bun

An experimental investigation of social preferences, their determinants and their role in the labour supply function. (2019) Smith, Richard

Additional materials from The history, genome and biology of NCTC 30: a non-pandemic Vibrio cholerae isolate from World War One. (2019) Dorman, Matthew J, Kane, Leanne, Domman, Daryl, Turnbull, Jake D, Cormie, Claire, Fazal, Mohammed-Abbas, Goulding, David A, Russell, Julie E, Alexander, Sarah, Thomson, Nicholas R.

A mixed-methods study of women’s sanitation utilization in informal settlements in Kenya. (2019) Winter, Samantha Cristine, Dreibelbis, Robert, Ningoma Dzombo, Millicent, Barchi, Francis

Additional file 2: of COMPare: a prospective cohort study correcting and monitoring 58 misreported trials in real time. (2019) Goldacre, Ben, Drysdale, Henry, Dale, Aaron, Milosevic, Ioan, Slade, Eirion, Hartley, Philip, Marston, Cicely, Powell-Smith, Anna, Heneghan, Carl, Mahtani, Kamal R

Additional file 2: of Modelling the spatial distribution of aquatic insects (Order Hemiptera) potentially involved in the transmission of Mycobacterium ulcerans in Africa. (2018) Cano, Jorge, Rodríguez, Antonio, Simpson, Hope, Tabah, Earnest N., Gómez, Jose F., Pullan, Rachel L.

Additional file 1: of Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. (2018) Sobkowiak, Benjamin, Glynn, Judith R., Houben, Rein M. G. J., Mallard, Kim, Phelan, Jody E., Guerra-Assunção, José Afonso, Banda, Louis, Mzembe, Themba, Viveiros, Miguel, McNerney, Ruth, Parkhill, Julian, Crampin, Amelia C., Clark, Taane G.

A Bayesian approach to understanding gender differences in tuberculosis disease burden. (2018) Horton, Katherine C, Sumner, Tom, Houben, Rein M G J, Corbett, Elizabeth L, White, Richard G

Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations. (2017) Diez Benavente, Ernest, Florez de Sessions, Paola, Moon, Robert W., Holder, Anthony A., Blackman, Michael J., Roper, Cally, Drakeley, Christopher J., Pain, Arnab, Sutherland, Colin J., Hibberd, Martin L., Campino, Susana, Clark, Taane G.

Assessing gut microbiota perturbations during the early phase of infectious diarrhea in Vietnamese children. (2017) The, Hao Chung, Florez de Sessions, Paola, Jie, Song, Pham Thanh, Duy, Thompson, Corinne N, Nguyen Ngoc Minh, Chau, Chu, Collins Wenhan, Tran, Tuan-Anh, Thomson, Nicholas R, Thwaites, Guy E, Rabaa, Maia A, Hibberd, Martin, Baker, Stephen

Additional file 2: Table 2. of Molecular evolution and population genetics of a Gram-negative binding protein gene in the malaria vector Anopheles gambiae (sensu lato). (2016) Salgueiro, Patrícia, Lopes, Ana Sofia, Mendes, Cristina, Charlwood, Jacques Derek, Arez, Ana Paula, Pinto, João, Silveira, Henrique

Additional file 4: of Why is malaria associated with poverty? Findings from a cohort study in rural Uganda. (2016) Tusting, Lucy S., Rek, John, Arinaitwe, Emmanuel, Staedke, Sarah G., Kamya, Moses R., Cano, Jorge, Bottomley, Christian, Johnston, Deborah, Dorsey, Grant, Lindsay, Steve W., Lines, Jo

A Metabolic Study of Huntington’s Disease. (2016) Nambron, Rajasree, Silajdžić, Edina, Kalliolia, Eirini, Ottolenghi, Chris, Hindmarsh, Peter, Hill, Nathan R, Costelloe, Seán J, Martin, Nicholas G, Positano, Vincenzo, Watt, Hilary C, Frost, Chris, Björkqvist, Maria, Warner, Thomas T

B

Bis-6-amidino-benzothiazole Derivative that Cures Experimental Stage 1 African Trypanosomiasis with a Single Dose. (2023) Racané, Livio, Ptiček, Lucija, Kostrun, Sanja, Raić-Malić, Silvana, Taylor, Martin Craig, Delves, Michael, Alsford, Sam, Olmo, Francisco, Francisco, Amanda Fortes, Kelly, John M.

Blood glucose concentration time series in mice infected with malaria parasites. (2021) Prior, Kimberley F., Middleton, Benita, Owolabi, Alíz T.Y., Westwood, Mary L., Holland, Jacob, O'Donnell, Aidan J., Blackman, Michael J., Skene, Debra J., Reece, Sarah E.

Bacteria genomic rates data: First release. (2016) Duchêne, Sebastian, Holt, Kathryn E., Weill, François-Xavier, Le Hello, Simon, Hawkey, Jane, Edwards, David J., Fourment, Mathieu, Holmes, Edward C.

Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data. (2014) Jombart, Thibaut, Cori, Anne, Didelot, Xavier, Cauchemez, Simon, Fraser, Christophe, Ferguson, Neil

C

Candidate coproantigen sequences in fasta format. (2023) Marlais, Tegwen, Bickford-Smith, Jack, Talavera-López, Carlos, Le, Hai, Chowdhury, Fatima, Miles, Michael A.

Collaborative Virtual Screening Identifies a 2‑Aryl-4-aminoquinazoline Series with Efficacy in an In Vivo Model of Trypanosoma cruzi Infection. (2023) Tawaraishi, Taisuke, Ochida, Atsuko, Akao, Yuichiro, Itono, Sachiko, Kamaura, Masahiro, Akther, Thamina, Shimada, Mitsuyuki, Canan, Stacie, Chowdhury, Sanjoy, Cao, Yafeng, Condroski, Kevin, Engkvist, Ola, Francisco, Amanda, Ghosh, Sunil, Kaki, Rina, Kelly, John M., Kimura, Chiaki, Kogej, Thierry, Nagaoka, Kazuya, Naito, Akira, Pairaudeau, Garry, Radu, Constantin, Roberts, Ieuan, Shum, David, Watanabe, Nao-aki, Xie, Huanxu, Yonezawa, Shuji, Yoshida, Osamu, Yoshida, Ryu, Mowbray, Charles, Perry, Benjamin

Chromatin state at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Comparative genomic analyses of Trypanosoma cruzi experimental hybrids. (2021) Matos, Gabriel Machado, Lewis, Michael D, Talavera-López, Carlos, Yeo, Matthew, Grisard, Edmundo C, Messenger, Louisa A, Miles, Michael A, Andersson, Björn

Can visual interpretation of NucliSens graphs reduce the need for repeat viral load testing? S1 Dataset. (2019) Handireketi, Newten, Timire, Collins, Shewade, Hemant Deepak, Munemo, Ellen, Nyagupe, Charles, Chipuka, Sandra, Sisya, Lucia, Dhitima, Ezekiel, Harries, Anthony D.

Comparative fitness analysis of D-cycloserine resistant mutants reveals both fitness-neutral and high-fitness cost genotypes. (2019) Evangelopoulos, Dimitrios, Prosser, Gareth A., Rodgers, Angela, Dagg, Belinda M., Khatri, Bhagwati, Ho, Mei Mei, Gutierrez, Maximiliano G., Cortes, Teresa

CYP2D6 polymorphisms and the safety and gametocytocidal activity of single dose primaquine for P. falciparum. (2019) Pett, Helmi, Bradley, John, Okebe, Joseph, Dicko, Alassane, Tiono, Alfred B, Goncalves, Bronner, Stone, Will J. R., Chen, Ingrid, Lanke, Kjerstin, Neuvonen, Mikko, Mustaniemi, Anna-Liina, Eziefula, Alice C, Gosling, Roly, D'Alessandro, Umberto, Drakeley, Chris, Niemi, Mikko, Bousema, Teun

Characterizing herpes simplex virus type 1 and type 2 seroprevalence declines and epidemiological association in the United States. (2019) Chemaitelly, Hiam, Nagelkerke, Nico, Omori, Ryosuke, Abu-Raddad, Laith J

Cyclic AMP signalling controls key components of malaria parasite host cell invasion machinery. (2019) Patel, Avnish, Perrin, Abigail J, Flynn, Helen R, Bisson, Claudine, Withers-Martinez, Chrislaine, Treeck, Moritz, Flueck, Christian, Nicastro, Giuseppe, Martin, Stephen R, Ramos, Andres, Gilberger, Tim W, Snijders, Ambrosius P, Blackman, Michael J., Baker, David

Chemogenomic profiling of anti-leishmanial efficacy and resistance in the related kinetoplastid parasite Trypanosoma brucei. (2019) Collett, Clare F, Kitson, Carl, Baker, Nicola, Steele-stallard, Heather B., Santrot, Marie Victoire, Hutchinson, Sebastian, Horn, David, Alsford, Sam

Clinical and laboratory-induced colistin-resistance mechanisms in Acinetobacter baumannii. (2019) Boinett, Christine J., Cain, Amy K., Hawkey, Jane, Do Hoang, Nhu Tran, Khanh, Nhu Nguyen Thi, Thanh, Duy Pham, Dordel, Janina, Campbell, James I., Lan, Nguyen Phu Huong, Mayho, Matthew, Langridge, Gemma C., Hadfield, James, Chau, Nguyen Van Vinh, Thwaites, Guy E., Parkhill, Julian, Thomson, Nicholas R., Holt, Kathryn E., Baker, Stephen

Computationally-guided drug repurposing enables the discovery of kinase targets and inhibitors as new schistosomicidal agents. (2018) Giuliani, Sandra, Silva, Arthur C., Borba, Joyce V. V. B., Ramos, Pablo I. P., Paveley, Ross A., Muratov, Eugene N., Andrade, Carolina Horta, Furnham, Nicholas

Consistent signatures of selection from genomic analysis of pairs of temporal and spatial Plasmodium falciparum populations from The Gambia. (2018) Amambua-Ngwa, Alfred, Jeffries, David, Amato, Roberto, Worwui, Archibald, Karim, Mane, Ceesay, Sukai, Nyang, Haddy, Nwakanma, Davis, Okebe, Joseph, Kwiatkowski, Dominic, Conway, David J., D'Alessandro, Umberto

Conjunctival transcriptome profiling of Solomon Islanders with active trachoma but without ocular Chlamydia trachomatis infection. (2018) Vasileva, Hristina, Butcher, Robert M. R., Roberts, Chrissy

Comparison of M. tuberculosis and M. bovis BCG in diluted whole blood cultures. (2015) Cliff, Jackie, Cho, Jang-Eun, Lee, Ji-Sook, Ronacher, Katharina, King, Elizabeth, van Helden, Paul, Walzl, Gerhard, Dockrell, Hazel

Conjunctival miRNA expression data in scarring and inflammatory trachoma. (2013) Derrick, Tamsyn, Roberts, Chrissy h., Rajasekhar, Megha, Burr, Sarah E., Joof, Hassan, Makalo, Pateh, Bailey, Robin L., Mabey, David C. W., Burton, Matthew J., Holland, Martin J.

Combining insecticide treated bed nets and indoor residual spraying for malaria vector control in Africa. (2012) Okumu, Fredros description

D

Dataset of 16S rRNA sequences of 111 healthy and Newcastle disease infected caecal samples from multiple chicken breeds of Pakistan. (2024) Ameer, Aqsa, Saleem, Farrukh, Keating, Ciara, Gundogdu, Ozan, Javed, Sundus, Ijaz, Umer Zeeshan

Delta shape data. (2024) Phelan, Jody

Data for: "Neonatal mortality risk for vulnerable newborn types in 15 countries using 125.5 million nationwide birth outcome records, 2000–2020". (2023) Suárez-Idueta, Lorena, Blencowe, Hannah, Okwaraji, Yemisrach B., Yargawa, Judith, Bradley, Ellen, Gordon, Adrienne, Flenady, Vicky, Paixao Cruz, Enny S., Barreto, Mauricio L., Lisonkova, Sarka, Wen, Qi, Velebil, Petr, Jírová, Jitka, Horváth-Puhó, Erzsebet, Sørensen, Henrik Toft, Sakkeus, Luule, Abuladze, Lili, Yunis, Khalid A., Bizri, Ayah Al, Barranco, Arturo, Broeders, Lisa, van Dijk, Aimée E., Alyafei, Fawziya, Olukade, Tawa O., Razaz, Neda, Söderling, Jonas, Smith, Lucy K., Draper, Elizabeth S., Lowry, Estelle, Rowland, Neil, Wood, Rachael, Monteath, Kirsten, Pereyra, Isabel, Pravia, Gabriella, Ohuma, Eric O., Lawn, Joy E. description

Data for: "Neonatal mortality risk of large for gestational age and macrosomic live births in 15 countries including 115.6 million nationwide linked records, 2000–2020". (2023) Suárez-Idueta, Lorena, Ohuma, Eric O., Chang, Chia-Jung, Hazel, Elizabeth A., Yargawa, Judith, Okwaraji, Yemisrach B., Bradley, Ellen, Gordon, Adrienne, Sexton, Jessica, Lawford, Harriet, Paixao cruz, Enny S., Falcão, Ila Rocha, Lisonkova, Sarka, Wen, Qi, Velebil, Petr, Jírová, Jitka, Horváth-Puhó, Erzsebet, Sørensen, Henrik Toft, Sakkeus, Luule, Abuladze, Lili, Yunis, Khalid A., Bizri, Ayah Al, Alvarez Lopez, Sonia, Broeders, Lisa, van Dijk, A. E., Alyafei, Fawziya, AlQubaisi, Mai, Razaz, Neda, Söderling, Jonas, Smith, Lucy K., Matthews, Ruth, Lowry, Estelle, Rowland, Neil, Wood, Rachael, Monteath, Kirsten, Pereyra, Isabel, Pravia, Gabriella, Lawn, Joy E., Blencowe, Hannah description

Development of a 2,4-Diaminothiazole Series for the Treatment of Human African Trypanosomiasis Highlights the Importance of Static–Cidal Screening of Analogues. (2023) Cleghorn, Laura A. T., Wall, Richard J., Albrecht, Sébastien, MacGowan, Stuart A., Norval, Suzanne, De Rycker, Manu, Woodland, Andrew, Spinks, Daniel, Thompson, Stephen, Patterson, Stephen, Corpas Lopez, Victoriano, Dey, Gourav, Collie, Iain T., Hallyburton, Irene, Kime, Robert, Simeons, Frederick R. C., Stojanovski, Laste, Frearson, Julie A., Wyatt, Paul G., Read, Kevin D., Gilbert, Ian H., Wyllie, Susan

Dengue virus type 4 isolate DET-P-0428-1 polyprotein (POLY) gene, complete cds; and sfRNA2 lncRNA gene, partial sequence. (2023) Ashall, James, Shah, Sonal, Biggs, Joseph R, Chang, Jui-Ning R, Jafari, Yalda, Brady, Oliver J., Mai, Huynh Kim, Lien, Le Thuy, Do Thai, Hung, Nguyen, Hien Anh Thi, Anh, Dang Duc, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Yoshida, Lay-Myint, Hafalla, Julius Clemence R, Hue, Stephane, Hibberd, Martin L.

Dengue virus type I isolate DEN-P-1098-1 polyprotein (POLY) gene, partial cds. (2023) Ashall, James, Shah, Sonal, Biggs, Joseph R, Chang, Jui-Ning R, Jafari, Yalda, Brady, Oliver J., Mai, Huynh Kim, Lien, Le Thuy, Do Thai, Hung, Nguyen, Hien Anh Thi, Anh, Dang Duc, Iwasaki, Chihiro, Kitamura, Noriko, Van Loock, Marnix, Herrera-Taracena, Guillermo, Rasschaert, Freya, Van Wesenbeeck, Liesbeth, Yoshida, Lay-Myint, Hafalla, Julius Clemence R, Hue, Stephane, Hibberd, Martin L.

Dataset: Seasonality and immunity to laboratory-confirmed seasonal coronaviruses (HCoV-NL63, HCoV-OC43, and HCoV-229E): results from the Flu Watch cohort study. (2020) Aldridge, Robert W., Lewer, Dan, Beale, Sarah, Johnson, Anne M., Zambon, Maria, Hayward, Andrew C., Fragaszy, Ellen

Dual RNA-seq of zebrafish larvae infected with Shigella sonnei. (2019) London School of Hygiene & Tropical Medicine

Data and code from: Estimating the burden of dengue and the impact of release of wMel Wolbachia infected mosquitoes in Indonesia: a modelling study. (2019) Brady, Oliver J.

Demonstration data for: "An interactive data visualisation application to investigate nosocomial transmission of infections". (2019) Smith, Catherine M, Allen, David J., Nawaz, Sameena, Kozlakidis, Zisis, Nastouli, Eleni, Hayward, Andrew, Ward, Katherine N.

Divergent roles for the RH5 complex components, CyRPA and RIPR in human-infective malaria parasites. (2019) Knuepfer, Ellen, Wright, Katherine E, Kumar Prajapati, Surendra, Rawlinson, Thomas A, Mohring, Franziska, Koch, Marion, Lyth, Oliver R, Howell, Steven A, Villasis, Elizabeth, Snijders, Ambrosius P, Moon, Robert W., Draper, Simon J, Rosanas-urgell, Anna, Higgins, Matthew K, Baum, Jake, Holder, Anthony A

Discovery and validation of a prognostic proteomic signature for tuberculosis progression: A prospective cohort study. (2019) Penn-Nicholson, Adam, Hraha, Thomas, Thompson, Ethan G, Sterling, David, Kimbung Mbandi, Stanley, Wall, Kirsten, Fisher, Michelle, Suliman, Sara, Shankar, Smitha, Hanekom, Willem A, Janjic, Nebojsa, Hatherill, Mark, Kaufmann, Stefan HE, Sutherland, Jayne, Walzl, Gerhard, De Groote, Mary Ann, Ochsner, Urs

Distinct evolutionary dynamics of horizontal gene transfer in drug resistant and virulent clones of Klebsiella pneumoniae. (2019) Wyres, Kelly L, Wick, Ryan R, Judd, Louise M, Froumine, Roni, Tokolyi, Alex, Gorrie, Claire L, Lam, Margaret MC, Duchêne, Sebastián, Jenney, Adam, Holt, Kathryn

Discovery of a Streptococcus pneumoniae serotype 33F capsular polysaccharide locus that lacks wcjE and contains a wcyO pseudogene. (2018) de Lencastre, Herminia, Manna, Sam, Dunne, Eileen M., Ortika, Belinda D., Pell, Casey L., Kama, Mike, Russell, Fiona M., Mungun, Tuya, Mulholland, Kim. E, Hinds, Jason, Satzke, Catherine

Data from: A randomized feasibility trial comparing four antimalarial drug regimens to induce Plasmodium falciparum gametocytemia in the controlled human malaria infection model. (2018) Reuling, Isaie J, van de Schans, Lisanne A, Coffeng, Luc E, Lanke, Kjerstin, Meerstein-Kessel, Lisette, Graumans, Wouter, van Gemert, Geert-Jan, Teelen, Karina, Siebelink-Stoter, Rianne, van de Vegte-Bolmer, Marga, de Mast, Quirijn, van der Ven, André J, Ivinson, Karen, Hermsen, Cornelus C, de Vlas, Sake, Bradley, John, Collins, Katharine A, Ockenhouse, Christian F, McCarthy, James, Sauerwein, Robert W, Bousema, Teun

Data from: Unravelling the immune signature of Plasmodium falciparum transmission-reducing immunity. (2018) Stone, Will J. R., Campo, Joseph J., Ouédraogo, André Lin, Meerstein-Kessel, Lisette, Morlais, Isabelle, Da, Dari, Cohuet, Anna, Nsango, Sandrine, Sutherland, Colin J., van de Vegte-Bolmer, Marga, Siebelink-Stoter, Rianne, van Gemert, Geert-Jan, Graumans, Wouter, Lanke, Kjerstin, Shandling, Adam D., Pablo, Jozelyn V., Teng, Andy A., Jones, Sophie, de Jong, Roos M., Fabra-García, Amanda, Bradley, John, Roeffen, Will, Lasonder, Edwin, Gremo, Giuliana, Schwarzer, Evelin, Janse, Chris J., Singh, Susheel K., Theisen, Michael, Felgner, Phil, Marti, Matthias, Drakeley, Chris, Sauerwein, Robert, Bousema, Teun, Jore, Matthijs M.

Decoding the network of Trypanosoma brucei proteins that determines sensitivity to apolipoprotein-L1. (2018) Currier, Rachel B., Cooper, Anneli, Burrell-saward, Hollie, MacLeod, Annette, Alsford, Sam

DNA methylation in children from The Gambia. (2017) Saffari, Ayden, Silver, MJ

Data for: Incidental mosquitocidal effect of an ivermectin mass drug administration on Anopheles farauti conducted for scabies control in the Solomon Islands. (2017) Marks, Michael description

Data from: Dynamics of cough frequency in adults undergoing treatment for pulmonary tuberculosis. (2017) Proaño, Alvaro, Bravard, Marjory A., López, José W., Lee, Gwenyth O., Bui, David, Datta, Sumona, Comina, Germán, Zimic, Mirko, Coronel, Jorge, Caviedes, Luz, Cabrera, José L., Salas, Antonio, Ticona, Eduardo, Vu, Nancy M., Kirwan, Daniela E., Loader, Maria-Cristina I., Friedland, Jon S., Moore, David A. J., Evans, Carlton A., Tracey, Brian H., Gilman, Robert H.

Data for: "Investigations into the within-host genomic diversity and phenotypic variation of Plasmodium falciparum". (2017) Murray, Lee description

Data for: Low Prevalence of Conjunctival Infection with Chlamydia trachomatis in a Treatment-Naïve Trachoma-Endemic Region of the Solomon Islands. (2016) Butcher, Robert M. R., Sokana, Oliver, Jack, Kelvin, Macleod, Colin K., Marks, Michael E., Kalae, Eric, Sui, Leslie, Russell, Charles, Tutill, Helena J., Williams, Rachel J., Breuer, Judith, Willis, Rebecca, Le Mesurier, Richard T., Mabey, David C. W., Solomon, Anthony W., Roberts, Chrissy h.

Data from: Assessment of markers of antimalarial drug resistance in Plasmodium falciparum isolates from pregnant women in Lagos, Nigeria. (2016) Agomo, Chimere Obiora, Oyibo, Wellington Aghoghovwia, Sutherland, Colin, Hallet, Rachael, Oguike, Mary C.

DNA methylome analysis in infants from The Gambia / Aflatoxin / Seasonality study. (2015) Hernandez-Vargas, H, Silver, Matthew

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Data from: Effective population size of malaria mosquitoes: large impact of vector control. (2013) Athrey, Giridhar, Hodges, Theresa K, Reddy, Michael R, Overgaard, Hans, Matias, Abrahan, Ridl, Frances C, Kleinschmidt, Immo, Caccone, Adalgisa, Slotman, Michel A

Data from: The microsporidian parasite Vavraia culicis as a potential late life-acting control agent of malaria. (2011) Lorenz, Lena, Koella, Jacob C description

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Environmental detection of vector larvae. (2022) London School of Hygiene & Tropical Medicine

Experimental data of two IRS hut trials with broflanilide 50WP conducted in Moshi, Tanzania. (2021) Snetselaar, Janneke, Rowland, Mark, Manunda, Baltazari, Kisengwa, Ezekia, Small, Graham, Malone, David, Mosha, Franklin, Kirby, Matthew grid_on

Effectiveness of an intervention for Aedes aegypti control scaled-up under an inter-sectoral approach in a Colombian city hyper-endemic for dengue virus. (2020) Quintero, Juliana, Ronderos Pulido, Nicolás, Logan, James, Ant, Thomas, Bruce, Jane, Carrasquilla, Gabriel

Establishment of environmentally sensitive DNA methylation states in the very early human embryo - Supplementary Materials. (2018) Kessler, Noah J., Waterland, Robert A., Prentice, Andrew M., Silver, Matt J.

Exploring the oxidative, antimicrobial and genomic properties of Campylobacter jejuni strains isolated from poultry. (2018) Ugarte-Ruiz, Maria, Domínguez, Lucas, Corcionivoschi, Nicolae, Wren, Brendan W., Dorrell, Nick, Gundogdu, Ozan

Electronic Supplementary Material for: "Host-mediated selection impacts the diversity of Plasmodium falciparum antigens within infections". (2018) Early, Angela M., Lievens, Marc, MacInnis, Bronwyn L., Ockenhouse, Christian F., Volkman, Sarah K., Adjei, Samuel, Agbenyega, Tsiri, Ansong, Daniel, Gondi, Stacey, Greenwood, Brian, Hamel, Mary, Odero, Chris, Otieno, Kephas, Otieno, Walter, Owusu-agyei, Seth, Asante, Kwaku Poku, Sorgho, Hermann, Tina, Lucas, Tinto, Halidou, Valea, Innocent, Wirth, Dyann F., Neafsey, Daniel E.

Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. (2018) McCarthy, Kerrigan, Fielding, Katherine, Churchyard, Gavin J., Grant, Alison D.

Economic evaluation of HIV-exposure Prophylaxis among men who have sex with men in England: Supplementary material. (2017) VanHoek, Albert

Effects of clinical and environmental factors on bronchoalveolar antibody responses to Pneumocystis jirovecii: A prospective cohort study of HIV+ patients. (2017) Schnapp, Lynn M, Blount, Robert J., Daly, Kieran R., Fong, Serena, Chang, Emily, Grieco, Katherine, Greene, Meredith, Stone, Stephen, Balmes, John, Miller, Robert F., Walzer, Peter D., Huang, Laurence

Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland. (2017) Moradigaravand, Danesh, Martin, Veronique, Peacock, Sharon, Parkhill, Julian

Excessive Cytolytic Responses Predict Tuberculosis Relapse After Apparently Successful Treatment. (2015) Cliff, Jackie, Cho, Jang-Eun, Lee, Ji-Sook, Ronacher, Katharina, King, Elizabeth, van Helden, Paul, Walzl, Gerhard, Dockrell, Hazel

Evidence for negative selection of gene variants that increase dependence on dietary choline in a Gambian cohort: Supplemental Data. (2015) Silver, Matt, Corbin, K. D., Hellenthal, G., da Costa, K.-A., Dominguez-salas, Paula, Moore, Sophie, Owen, J., Prentice, Andrew, Hennig, Branwen, Zeisel, S. H.

Expression data from Gambian children with and without the clinical signs of active trachoma: HG-focus array. (2011) Holland, Martin J., Natividad, Angels, Mabey, David, Jeffries, David, Burton, Matthew J., Bailey, Robin L.

Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. (2011) Holland, Martin J., Natividad, Angels, Mabey, David C, Jeffries, David, Burton, Matthew J, Bailey, Robin L., Freeman, Tom C.

Expression data from Gambian children with and without the clinical signs of active trachoma: U133 Plus2.0 array. (2010) Natividad, A., Freeman, T. C., Jeffries, D., Burton, Matthew J., Mabey, David C. W., Bailey, Robin L., Holland, Martin J.

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Genomic and functional analysis of rmp locus variants in Klebsiella pneumoniae. (2025) Lam, Margaret M. C., Salisbury, Stephen M., Treat, Logan P., Wick, Ryan R., Judd, Louise M., Wyres, Kelly L, Brisse, Sylvain, Walker, Kimberly A, Miller, Virginia L, Holt, Kathryn E.

Genome-wide association study of leprosy in Malawi and Mali. S2 Table. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

gbpA and chiA genes are not uniformly distributed amongst diverse Vibrio cholerae. (2021) Fennell, Thea G., Blackwell, Grace A., Thomson, Nicholas R., Dorman, Matthew J.

Genome-wide association studies identify 137 loci for DNA methylation biomarkers of aging. (2020) McCartney, Daniel, Min, Josine, Richmond, Rebecca, Lu, Ake, Sobczyk, Maria, Davies, Gail, Broer, Linda, Guo, Xiuqing, Jeong, Ayoung, Jung, Jeeson, Kasela, Silva, Katrinli, Seyma, Kuo, Pei-Lun, Matias-Garcia, Pamela, Mishra, Pashupati, Nygaard, Marianne, Palviainen, Teemu, Patki, Amit, Raffield, Laura, Ratliff, Scott, Richardson, Tom, Robinson, Oliver, Sorensen, Mette, Sun, Dianjianyi, Tsai, Pei-Chien, van der Zee, Matthijs, Wang, Xiaochuan, Wang, Yunzhang, Xia, Rui, Xu, Zongli, Yao, Jie, Zhao, Wei, Deary, Ian, Relton, Caroline L., Horvath, Steve, Marioni, Riccardo

Genome-wide Assessment of Antimicrobial Tolerance in Yersinia pseudotuberculosis Under Ciprofloxacin Stress. (2019) Willcocks, Sam

Genome-wide analysis of population structure and adaptation of Plasmodium knowlesi in peninsular Malaysia. (2019) London School of Hygiene & Tropical Medicine

Genetic dissociation of three antigenic genes in Plasmodium ovale curtisi and Plasmodium ovale wallikeri. (2019) Saralamba, Naowarat, Nosten, Francois, Sutherland, Colin J., Paula Arez, Ana, Snounou, Georges, White, Nicholas J, Day, Nicholas PJ, Dondorp, Arjen M, Imwong, Mallika

Genome organization of dengue and Zika viruses. (2019) Sim, Adelene Y. L., Huber, Roland G., Lim, Xin Ni, Ng, Wy Ching, Chawla, Tanu, Aw, JG, Lim, Su Ying, Shen, Y, Boon, K, Choy, Milly M., Wilm, Andreas, de Sessions, Paola Florez, Hibberd, Martin, Nagarajan, Niranjan, Ooi, Eng Eong, Bond, Peter J., Sessions, October M., Wan, Yue

Genomic analysis of Klebsiella pneumoniae isolates from Malawi reveals acquisition of multiple ESBL determinants across diverse lineages. (2019) Musicha, Patrick, Msefula, Chisomo L, Mather, Alison E, Chaguza, Chrispin, Cain, Amy K, Peno, Chikondi, Kallonen, Teemu, Khonga, Margaret, Denis, Brigitte, Gray, Katherine J, Heyderman, Robert S, Thomson, Nicholas R, Everett, Dean B, Feasey, Nicholas A

Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. (2018) Sepúlveda, Nuno, Phelan, Jody, Diez-Benavente, Ernest, Campino, Susana, Clark, Taane G., Hopkins, Heidi, Sutherland, Colin, Drakeley, Chris J., Beshir, Khalid B.

Genomic history of the seventh pandemic of cholera in Africa. (2017) Weill, François-Xavier, Domman, Daryl, Njamkepo, Elisabeth, Tarr, Cheryl, Rauzier, Jean, Fawal, Nizar, Keddy, Karen H., Salje, Henrik, Moore, Sandra, Mukhopadhyay, Asish K., Bercion, Raymond, Luquero, Francisco J., Ngandjio, Antoinette, Dosso, Mireille, Monakhova, Elena, Garin, Benoit, Bouchier, Christiane, Pazzani, Carlo, Mutreja, Ankur, Grunow, Roland, Sidikou, Fati, Bonte, Laurence, Breurec, Sébastien, Damian, Maria, Njanpop-Lafourcade, Berthe-Marie, Sapriel, Guillaume, Page, Anne-Laure, Hamze, Monzer, Henkens, Myriam, Chowdhury, Goutam, Mengel, Martin, Koeck, Jean-Louis, Fournier, Jean-Michel, Dougan, Gordon, Grimont, Patrick A. D., Parkhill, Julian, Holt, Kathryn E., Piarroux, Renaud, Ramamurthy, Thandavarayan, Quilici, Marie-Laure, Thomson, Nicholas R.

Genome-wide and protein kinase-focused RNAi screens reveal conserved and novel damage response pathways in Trypanosoma brucei. (2017) Sabatini, Robert, Stortz, Jennifer A., Serafim, Tiago D., Alsford, Sam, Wilkes, Jonathan, Fernandez-Cortes, Fernando, Hamilton, Graham, Briggs, Emma, Lemgruber, Leandro, Horn, David, Mottram, Jeremy C., McCulloch, Richard

Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi. (2013) Bronowski, Christina, Fookes, Maria C., Gilderthorp, Ruth, Ashelford, Kevin E., Harris, Simon R., Phiri, Amos, Hall, Neil, Gordon, Melita A., Wain, John, Hart, Charles A., Wigley, Paul, Thomson, Nicholas R., Winstanley, Craig

Genome-wide transcriptional profiling of HIV positive and negative adults with active tuberculosis, latent TB infection and other diseases. (2013) Anderson, Suzanne T, Coin, Lachlan J, Crampin, Amelia C., Dockrell, Hazel M., Eley, Brian, French, Neil, Heyderman, Robert S., Hibberd, Martin L., Kaforou, Myrsini, Kern, Florian, Langford, Paul R., Levin, M, Ling, Ling, Wilkinson, Robert J., Wright, Victoria J.

Global Profiling of Proteolysis during Rupture of Plasmodium falciparum from the Host Erythrocyte. (2010) Bowyer, Paul, Simon, Gabriel M, Cravatt, Benjamin F, Bogyo, Matthew

Genetic flux over time in the Salmonella lineage. (2007) Vernikos, Georgios S, Thomson, Nicholas R., Parkhill, Julian

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High burden and seasonal variation of paediatric scabies and pyoderma prevalence in The Gambia: A cross-sectional study. Main study dataset. (2019) Armitage, Edwin, Senghore, Elina, Darboe,, Saffiatou, Momodou, Barry, Camara, Janko, Bah, Sulayman, Marks, Michael, Cerami, Carla, Roca, Anna, Antonio, Martin, Turner, Claire E., De silva, Thushan

HIV prevalence, spatial distribution and risk factors for HIV infection in the Kenyan fishing communities of Lake Victoria. (2019) Kwena, Zachary A, Njuguna, Stella W, Ssetala, Ali, Seeley, Janet, Nielsen, Leslie, De Bont, Jan, Bukusi, Elizabeth A

hicap validation assembly set. (2019) Watts, Stephen, Holt, Kathryn E.

Hierarchical genomic analysis of carried and invasive serogroup A Neisseria meningitidis during the 2011 epidemic in Chad. (2017) Diallo, Kanny, Gamougam, Kadija, Daugla, Doumagoum M., Harrison, Odile B., Bray, James E., Caugant, Dominique A., Lucidarme, Jay, Trotter, Caroline L., Hassan-King, Musa, Stuart, James M., Manigart, Olivier, Greenwood, Brian M., Maiden, Martin C. J.

High Throughput Screening Identifies Novel Lead Compounds with Activity against Larval, Juvenile and Adult Schistosoma mansoni. S1 Table. (2016) Mansour, Nuha R., Paveley, Ross, Gardner, J. Mark F., Bell, Andrew S., Parkinson, Tanya, Bickle, Quentin grid_on

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. (2008) Holt, Kathryn E, Parkhill, Julian, Mazzoni, Camila J, Roumagnac, Philippe, Weill, François-Xavier, Goodhead, Ian, Rance, Richard, Baker, Stephen, Maskell, Duncan J, Wain, John, Dolecek, Christiane, Achtman, Mark, Dougan, Gordon

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Identification of Reduced Host Transcriptomic Signatures for Tuberculosis Disease and Digital PCR-Based Validation and Quantification. (2021) Gliddon, Harriet D., Kaforou, Myrsini, Alikian, Mary, Habgood-Coote, Dominic, Zhou, Chenxi, Oni, Tolu, Anderson, Suzanne T., Brent, Andrew J., Crampin, Amelia C., Eley, Brian, Heyderman, Robert, Kern, Florian, Langford, Paul R., Ottenhoff, Tom H. M., Hibberd, Martin L., French, Neil, Wright, Victoria J., Dockrell, Hazel M., Coin, Lachlan J., Wilkinson, Robert J., Levin, Michael

Investigating a Plasmodium falciparum erythrocyte invasion phenotype switch at the whole transcriptome level. (2020) Nyarko, Prince B., Tarr, Sarah J., Aniweh, Yaw, Stewart, Lindsay B., Conway, David J., Awandare, Gordon A.

Insights into malaria susceptibility using genome-wide data on 17,000 individuals from Africa, Asia and Oceania. (2019) Band, Gavin, Si Le, Quang, Clarke, Geraldine M., Kivinen, Katja, Hubbart, Christina, Jeffreys, Anna E., Rowlands, Kate, Leffler, Ellen M., Jallow, Muminatou, Conway, David, Sisay-Joof, Fatoumatta, Sirugo, Giorgio, d’Alessandro, Umberto, Toure, Ousmane B., Thera, Mahamadou A., Konate, Salimata, Sissoko, Sibiri, Mangano, Valentina D., Bougouma, Edith C., Sirima, Sodiomon B., Amenga-Etego, Lucas N., Ghansah, Anita K., Hodgson, Abraham V. O., Wilson, Michael D., Enimil, Anthony, Ansong, Daniel, Evans, Jennifer, Ademola, Subulade A., Apinjoh, Tobias O., Ndila, Carolyne M., Manjurano, Alphaxard, Drakeley, Chris, Reyburn, Hugh, Hoan Phu, Nguyen, Quyen, Nguyen Thi Ngoc, Quang Thai, Cao, Tinh Hien, Tran, Teo, Yik Ying, Manning, Laurens, Laman, Moses, Michon, Pascal, Karunajeewa, Harin, Siba, Peter, Allen, Steve, Allen, Angela, Bahlo, Melanie, Davis, Timothy M. E., Simpson, Victoria, Shelton, Jennifer, Spencer, Chris C. A., Busby, George B. J., Kerasidou, Angeliki, Drury, Eleanor, Stalker, Jim, Dilthey, Alexander, Mentzer, Alexander J., McVean, Gil, Bojang, Kalifa A., Doumbo, Ogobara, Modiano, David, Koram, Kwadwo A., Agbenyega, Tsiri, Amodu, Olukemi K., Achidi, Eric, Williams, Thomas, Marsh, Kevin, Riley, Eleanor, Molyneux, Malcolm, Taylor, Terrie, Dunstan, Sarah J., Farrar, Jeremy, Mueller, Ivo, Rockett, Kirk A., Kwiatkowski, Dominic P.

Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers. (2019) Ingle, Danielle J., Nair, Satheesh, Hartman, Hassan, Ashton, Philip M., Dyson, Zoe, Day, Martin, Freedman, Joanne, Chattaway, Marie A., Holt, Kathryn E., Dallman, Timothy J.

Investigation of the role of typhoid toxin in acute typhoid fever in a human challenge model. (2019) Gibani, Malick M, Jones, Elizabeth, Barton, Amber, Jin, Celina, Meek, Juliette, Camara, Susana, Galal, Ushma, Heinz, Eva, Rosenberg-Hasson, Yael, Obermoser, Gerlinde, Jones, Claire, Campbell, Danielle, Black, Charlotte, Thomaides-Brears, Helena, Darlow, Christopher, Dold, Christina, Silva-Reyes, Laura, Blackwell, Luke, Lara-Tejero, Maria, Jiao, Xuyao, Stack, Gabrielle, Blohmke, Christoph J., Hill, Jennifer, Angus, Brian, Dougan, Gordon, Galán, Jorge, Pollard, Andrew J.

In-depth proteomic characterization of Schistosoma haematobium: Towards the development of new tools for elimination. (2019) Sotillo, Javier, Pearson, Mark S, Becker, Luke, Mekonnen, Gebeyaw G, Amoah, Abena S, Dam, Govert van, Corstjens, Paul LAM, Murray, Janice, Mduluza, Takafira, Mutapi, Francisca, Loukas, Alex

Identification of Trypanosoma brucei apolipoprotein-L1 sensitivity determinants by RNAi library selection. (2017) London School of Hygiene & Tropical Medicine

Identification of Trypanosoma brucei human serum sensitivity determinants by RNAi library selection. (2017) London School of Hygiene & Tropical Medicine

Integrated view of Vibrio cholerae in the Americas. (2017) Domman, Daryl, Quilici, Marie-Laure, Dorman, Matthew J., Njamkepo, Elisabeth, Mutreja, Ankur, Mather, Alison E., Delgado, Gabriella, Morales-Espinosa, Rosario, Grimont, Patrick A. D., Lizárraga-Partida, Marcial Leonardo, Bouchier, Christiane, Aanensen, David M., Kuri-Morales, Pablo, Tarr, Cheryl L., Dougan, Gordon, Parkhill, Julian, Campos, Josefina, Cravioto, Alejandro, Weill, François-Xavier, Thomson, Nicholas R.

Intensive trapping of blood-fed Anopheles darlingi in Amazonian Peru reveals unexpectedly high proportions of avian blood-meals. (2017) Moreno leirana, Marta, Saavedra, Marlon P., Bickersmith, Sara A., Prussing, Catherine, Michalski, Adrian, Tong Rios, Carlos, Vinetz, Joseph, Conn, Jan E.

Is Beta Radiation Better than 5 Flurouracil as an Adjunct for Trabeculectomy Surgery When Combined with Cataract Surgery? A Randomised Controlled Trial. (2016) Dhalla, Kazim, Cousens, Simon, Bowman, Richard, Wood, Mark, Murdoch, Ian

Influence of LAR and VAR on Para-Aminopyridine Antimalarials Targetting Haematin in Chloroquine-Resistance. Physicochemical and other parameters for the compounds studied. (2016) Warhurst, David C., Craig, John C., Raheem, K. Saki grid_on

Inverse relationship between microRNA-155 and -184 expression with increasing conjunctival inflammation during ocular Chlamydia trachomatis infection. (2016) Derrick, Tamsyn, Last, Anna R., Burr, Sarah E., Roberts, Chrissy h., Nabicassa, Meno, Cassama, Eunice, Bailey, Robin L., Mabey, David C. W., Burton, Matthew J., Holland, Martin J.

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Kinetic properties of the recombinantly expressed PfPKGWT, PfPKGY214, PfPKGSTmut, PfPKGT695A, PfPKGT695E and CD analysis of PfPKGWT and PfPKGSTmut. (2024) Koussis, Konstantinos, Haase, Silvia, Withers-Martinez, Chrislaine, Flynn, Helen R, Kunzelmann, Simone, Christodoulou, Evangelos, Ibrahim, Fairouz, Skehel, Mark, Baker, David A, Blackman, Michael J

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Limit of detection dataset for PCR assays. (2025) Braima, Kamil A., Piera, Kim A., Lubis, Inke N. D., Noviyanti, Rintis, Rajahram, Giri S., Kariodimedjo, Pinkan, Nainggolan, Irbah R. A., Permatasari, Ranti, Trianty, Leily, Amalia, Ristya, Sakam, Sitti Saimah, Tan, Angelica F., William, Timothy, Westaway, Jacob A. F., Lee, PingChin, Daim, Sylvia, Surendra, Henry, Christy, Nathaniel, Letizia, Andrew G., Peatey, Christopher L., Moideen, Mohd Arshil, Barber, Bridget E., Sutherland, Colin J., Anstey, Nicholas M., Grigg, Matthew J.

Leprosy association statistics for suggestive associations in Malawi. S1 Table. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Low and heterogeneous prevalence of glucose-6-phosphate dehydrogenase deficiency in different settings in Ethiopia using phenotyping and genotyping approaches. (2018) Shitaye, Getasew, Gadisa, Endalamaw, Grignard, Lynn, Shumie, Girma, Chali, Wakweya, Menberu, Temesgen, Belachew, Mulualem, Tegegn, Getaneh, Challi, Sagni, Curry, Jonathan, Mahey, Laleta, Hailu, Tsegaye, Mamo, Hassen, Menon, Menakath, Balcha, Taye, Aseffa, Abraham, Drakeley, Chris, Bousema, Teun, Tadesse, Fitsum G.

Low Ambient Temperature and Intracerebral Hemorrhage: The INTERACT2 Study. S1 Table. (2016) Wang, Xiaoying, Zheng, Danni, Arima, Hisatomi, Sato, Shoichiro, Gasparrini, Antonio, Heeley, Emma, Delcourt, Candice, Lo, Serigne, Huang, Yining, Wang, Jiguang, Stapf, Christian, Robinson, Thompson, Lavados, Pablo, Chalmers, John, Anderson, Craig S.

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Multivariate GWAS analysis reveals loci associated with liver functions in continental African populations. S1 File. (2023) Soremekun, Chisom, Machipisa, Tafadzwa, Soremekun, Opeyemi, Pirie, Fraser, Oyekanmi, Nashiru, Motala, Ayesha A, Chikowore, Tinashe, Fatumo, Segun

mlcotten13/Measles_primers. (2022) Cotten, Matthew

Microscopy and contamination rates. (2019) Homolka, Susanne, Zallet, Julia, Albert, Heidi, Witt, Anne-Kathrin, Kranzer, Katharina

Malaria vector species in Amazonian Peru co-occur in larval habitats but have distinct larval microbial communities. (2019) Prussing, Catherine, Saavedra, Marlon P., Bickersmith, Sara A, Alava, Freddy, Guzman, Mitchel, Manrique, Edgar, Carrasco-Escobar, Gabriel, Moreno, Marta

Meta-analysis results of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight. (2019) Küpers, Leanne K, Monnereau, Claire, Sharp, Gemma C, Yousefi, Paul, Salas, Lucas A, Ghantous, Akram Ghantous, Page, Christian M, Reese, Sarah E, Wilcox, Allen J, Czamara, Darina, Starling, Anne P, Novoloaca, Alexei, Lent, Samantha, Roy, Ritu, Hoyo, Cathrine, Breton, Carrie V, Allard, Catherine, Just, Allan C, Bakulski, Kelly M, Holloway, John W, Everson, Todd M, Xu, Cheng-Jian, Huang, Rae-Chi, van der Plaat, Diana A., Wielscher, Matthias, Kebede Merid, Simon, Ullemar, Vilhelmina, Rezwan, Faisal I, Lahti, Jari, van Dongen, Jenny, Langie, Sabine AS, Richardson, Tom G, Magnus, Maria C, Nohr, Ellen A, Xu, Zongli, Duijts, Liesbeth, Zhao, Shanshan, Zhang, Weiming, Plusquin, Michelle, DeMeo, Dawn L, Solomon, Olivia, Heimovaara, Joosje H, Jima, Dereje D, Gao, Lu, Bustamante, Mariona, Perron, Patrice, Wright, Robert O, Hertz-Picciotto, Irva, Zhang, Hongmei, Karagas, Margaret R, Gehring, Ulrike, Marsit, Carmen J, Beilin, Lawrence J, Vonk, Judith M, Jarvelin, Marjo-Riitta, Bergström, Anna, Örtqvist, Anne K, Ewart, Susan, Villa, Pia M, Moore, Sophie, Willemsen, Gonneke, Standaert, Arnout RL, Håberg, Siri E, Sørensen, Thorkild IA, Taylor, Jack A, Räikkönen, Katri, Yang, Ivana V, Kechris, Katerina, Nawrot, Tim S, Silver, Matt J., Gong, Yun Yun, Richiardi, Lorenzo, Kogevinas, Manolis, Litonjua, Augusto A, Eskenazi, Brenda, Huen, Karen, Mbarek, Hamdi, Maguire, Rachel L, Dwyer, Terence, Vrijheid, Martine, Bouchard, Luigi, Baccarelli, Andrea A, Croen, Lisa A, Karmaus, Wilfried, Anderson, Denise, de Vries, Maaike, Sebert, Sylvain, Kere, Juha, Karlsson, Robert, Hasan Arshad, Syed, Hämäläinen, Esa, Routledge, Michael N, Boomsma, Dorret I, Feinberg, Andrew P, Newschaffer, Craig J, Govarts, Eva, Moisse, Matthieu, Fallin, M. Daniele, Melén, Erik, Prentice, Andrew M., Kajantie, Eero, Almqvist, Catarina, Oken, Emily, Dabelea, Dana, Boezen, H. Marike, Melton, Phillip E, Wright, Rosalind J, Koppelman, Gerard H, Trevisi, Letizia, Hivert, Marie-France, Sunyer, Jordi, Munthe-Kaas, Monica C, Murphy, Susan K, Corpeleijn, Eva, Wiemels, Joseph, Holland, Nina, Herceg, Zdenko, Binder, Elisabeth B, Smith, George Davey, Jaddoe, Vincent WV, Lie, Rolv T, Nystad, Wenche, London, Stephanie J, Lawlor, Debbie A, Relton, Caroline L., Snieder, Harold, Felix, Janine F

MOESM1 of Vector competence, vectorial capacity of Nyssorhynchus darlingi and the basic reproduction number of Plasmodium vivax in agricultural settlements in the Amazonian Region of Brazil. (2019) Sallum, Maria Anice M, Conn, Jan E, Bergo, Eduardo S, Laporta, Gabriel Z, Chaves, Leonardo SM, Bickersmith, Sara A, de Oliveira, Tatiane MP, Figueira, Elder Augusto G, Moresco, Gilberto, Lêuda, Olívêr, Struchiner, Claudio J, Yakob, Laith, Massad, Eduardo

Methylation and transcription analysis of Mycobacterium tuberculosis. (2018) London School of Hygiene & Tropical Medicine

MOESM1 of Insecticide resistance in Anopheles arabiensis from Ethiopia (2012-2016): a nationwide study for insecticide resistance monitoring. (2017) Messenger, Louisa A., Shililu, Josephat, Irish, Seth R., Anshebo, Gedeon Yohannes, Tesfaye, Alemayehu Getachew, Ye-Ebiyo, Yemane, Chibsa, Sheleme, Dengela, Dereje, Dissanayake, Gunawardena, Kebede, Estifanos, Zemene, Endalew, Asale, Abebe, Yohannes, Mekonnen, Taffese, Hiwot Solomon, George, Kristen, Fornadel, Christen, Seyoum, Aklilu, Wirtz, Robert A., Yewhalaw, Delenasaw

Micro-epidemiological structuring of Plasmodium falciparum parasite populations in regions with varying transmission intensities in Africa. (2017) Omendo, Irene, Mogeni, Polycarp, Bousema, Teun, Rockett, Kirk A., Amambua-Ngwa, Alfred, Oyier, Isabella, Stevenson, Jennifer C., Baidjoe, Amrish, de Villiers, Etienne P., Fegan, Greg, Ross, Amanda, Hubbart, Christina, Jeffreys, Anne, Williams, Thomas N., Kwiatkowski, Dominic, Bejon, Philip

Multiplex, DNase-free one-step reverse transcription PCR for Plasmodium 18S rRNA and spliced gametocyte-specific mRNAs. (2017) Hanron, Amelia E., Billman, Zachary P., Seilie, Annette M., Olsen, Tayla M., Fishbaugher, Matthew, Chang, Ming, Rueckle, Thomas, Andenmatten, Nicole, Greenhouse, Bryan, Arinaitwe, Emmanuel, Rek, John, Das, Smita, Domingo, Gonzalo J., Shipman, Kelly, Kappe, Stefan H., Kublin, James G., Murphy, Sean C.

Mus musculus. (2016) London School of Hygiene & Tropical Medicine

MOESM4 of Comparison of allele frequencies of Plasmodium falciparum merozoite antigens in malaria infections sampled in different years in a Kenyan population. (2016) Ochola-Oyier, Lynette Isabella, Okombo, John, Wagatua, Njoroge, Ochieng, Jacob, Tetteh, Kevin K, Fegan, Greg, Bejon, Philip, Marsh, Kevin grid_on

MINIMat data. (2016) Carpenter, David O., Svefors, Pernilla, Rahman, Anisur, Ekström, Eva-Charlotte, Khan, Ashraful Islam, Lindström, Emma, Persson, Lars Ake, Ekholm Selling, Katarina

Modulation of the Surface Proteome through Multiple Ubiquitylation Pathways in African Trypanosomes: Supporting Information. (2015) Zoltner, Martin, Leung, Ka Fai, Alsford, Sam, Horn, David, Field, Mark C

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Nanopore-only assemblies for genomic surveillance of the global priority drug-resistant pathogen, Klebsiella pneumoniae. (2023) Foster-Nyarko, Ebenezer, Holt, Kathryn E., Cottingham, Hugh, Wick, Ryan, Judd, Louise M., Lam, Margaret, Wyres, Kelly L., Stanton, Thomas, Tsang, Kara K., David, Sophia, Bridel, Sébastien, Palma, Federica, Aanensen, David M, Brisse, Sylvain

National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Secure Access. (2021) Russell, M., NatCen Social Research, London School of Hygiene & Tropical Medicine, Senior, M.

Next-generation sequencing of the microbiome of the conjunctiva in patients with and without clinical symptoms of trachoma. (2019) London School of Hygiene & Tropical Medicine

Nationwide Trends in Bacterial Meningitis before the Introduction of 13-Valent Pneumococcal Conjugate Vaccine—Burkina Faso, 2011–2013. (2016) Kambiré, Dinanibè, Soeters, Heidi M, Ouédraogo-Traoré, Rasmata, Medah, Isaïe, Sangare, Lassana, Yaméogo, Issaka, Sawadogo, Guetawendé, Ouédraogo, Abdoul-Salam, Hema-Ouangraoua, Soumeya, McGee, Lesley, Srinivasan, Velusamy, Aké, Flavien, Congo-Ouédraogo, Malika, Sanou, Soufian, Ky Ba, Absatou, Novak, Ryan T., Van Beneden, Chris

Natural resistance to Meningococcal Disease related to CFH loci: Meta-analysis of genome-wide association studies. (2016) Martinón-Torres, Federico, Png, Eileen, Khor, Chiea Chuen, Davila, Sonia, Wright, Victoria J., Sim, Kar Seng, Vega, Ana, Fachal, Laura, Inwald, David, Nadel, Simon, Carrol, Enitan D., Martinón-Torres, Nazareth, Alonso, Sonia Marcos, Carracedo, Angel, Morteruel, Elvira, López-Bayón, Julio, Torre, Andrés Concha, Monge, Cristina Calvo, de Aguilar, Pilar Azcón González, Torné, Elisabeth Esteban, Martínez-Padilla, María del Carmen, Martinón-Sánchez, José María, Levin, Michael, Hibberd, Martin L., Salas, Antonio

Nano LC MS-MS peptide matches from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. (2016) Lewin, Alex, Hamilton, Shea, Witkover, Aviva, Langford, Paul, Nicholas, Richard, Chataway, Jeremy, Bangham, Charles R.M.

No evidence for higher risk of cancer in patients with multiple sclerosis taking cladribine: Data supplement. (2015) Pakpoor, Julia, Disanto, Giulio, Altmann, Daniel, Pavitt, Sue, Turner, Benjamin P, Marta, Monica, Juliusson, Gunnar, Baker, David, Chataway, Jeremy, Schmierer, Klaus

New Routes to Phylogeography: A Bayesian Structured Coalescent Approximation. (2015) De Maio, Nicola, Wu, Chieh-Hsi, O'Reilly, Kathleen M., Wilson, Daniel

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Optimization and Characterization of the Antimalarial Activity of N-Aryl Acetamides that are Susceptible to Mutations in ROM8 and CSC1. (2025) Nguyen, William, Boulet, Coralie, Dans, Madeline G., Loi, Katie, Jarman, Kate E., Barnes, Claudia B. G., Yeo, Tomas, Sheth, Tanaya, Mukherjee, Partha, Chakraborty, Arnish, Famodimu, Mufuliat, Delves, Michael J., Pollard, Harry, Sutherland, Colin J., Coyle, Rachael, Sevilleno, Nicole, Boonyalai, Nonlawat, Lee, Marcus C. S., Rabie, Tayla, Birkholtz, Lyn-Marié, Baud, Delphine, Brand, Stephen, Chowdury, Mrittika, de Koning-Ward, Tania F., Fidock, David A., Gilson, Paul R., Sleebs, Brad E.

Overall data including separate worksheets for genotypic resistance and species genotypes; host blood meal and sporozoite positivity data. (2021) Hamid-Adiamoh, Majidah, Nwakanma, Davis, Assogba, Sessinou Benoit, Ndiath, Mamadou Ousmane, D'Alessandro, Umberto, Afrane, Yaw A., Amambua-Ngwa, Alfred

Ocular immune responses, Chlamydia trachomatis infection and clinical signs of trachoma before and after azithromycin mass drug administration in a treatment naïve trachoma-endemic Tanzanian community. (2019) Ramadhani, Athumani, Derrick, Tamsyn, Macleod, David, Massae, Patrick, Malisa, Aiweda, Mbuya, Kelvin, Mtuy, Tara, Makupa, William, Roberts, Chrissy H., Bailey, Robin L., Mabey, David, Holland, Martin J., Burton, Matthew J.

Occurrence point data from: "The current and future global distribution and population at risk of dengue". (2019) Messina, Jane P, Brady, Oliver J, Golding, Nick, Kraemer, Moritz UG, Wint, G R William, Ray, Sarah E, Pigott, David M, Shearer, Freya M, Johnson, Kimberly, Earl, Lucas, Marczak, Laurie B, Shirude, Shreya, Davis Weaver, Nicole, Gilbert, Marius, Velayudhan, Raman, Jones, Peter, Jaenisch, Thomas, Scott, Thomas W, Reiner Jr, Robert C, Hay, Simon I

Open Source Drug Discovery: Highly Potent Antimalarial Compounds Derived from the Tres Cantos Arylpyrroles. (2016) Williamson, Alice E., Ylioja, Paul M., Robertson, Murray N., Antonova-Koch, Yevgeniya, Avery, Vicky, Baell, Jonathan B., Batchu, Harikrishna, Batra, Sanjay, Burrows, Jeremy N., Bhattacharyya, Soumya, Calderon, Felix, Charman, Susan A., Clark, Julie, Crespo, Benigno, Dean, Matin, Debbert, Stefan L., Delves, Michael, Dennis, Adelaide S. M., Deroose, Frederik, Duffy, Sandra, Fletcher, Sabine, Giaever, Guri, Hallyburton, Irene, Gamo, Francisco-Javier, Gebbia, Marinella, Guy, R. Kiplin, Hungerford, Zoe, Kirk, Kiaran, Lafuente-Monasterio, Maria J., Lee, Anna, Meister, Stephan, Nislow, Corey, Overington, John P., Papadatos, George, Patiny, Luc, Pham, James, Ralph, Stuart A., Ruecker, Andrea, Ryan, Eileen, Southan, Christopher, Srivastava, Kumkum, Swain, Chris, Tarnowski, Matthew J., Thomson, Patrick, Turner, Peter, Wallace, Iain M., Wells, Timothy N. C., White, Karen, White, Laura, Willis, Paul, Winzeler, Elizabeth A., Wittlin, Sergio, Todd, Matthew H.

Open Source Drug Discovery with the Malaria Box Compound Collection for Neglected Diseases and Beyond. (2016) Van Voorhis, Wesley C., Adams, John H., Adelfio, Roberto, Ahyong, Vida, Akabas, Myles H., Alano, Pietro, Alday, Aintzane, Alemán Resto, Yesmalie, Alsibaee, Aishah, Alzualde, Ainhoa, Andrews, Katherine T., Avery, Simon V., Avery, Vicky M., Ayong, Lawrence, Baker, Mark, Baker, Stephen, Ben Mamoun, Choukri, Bhatia, Sangeeta, Bickle, Quentin, Bounaadja, Lotfi, Bowling, Tana, Bosch, Jürgen, Boucher, Lauren E., Boyom, Fabrice F., Brea, Jose, Brennan, Marian, Burton, Audrey, Caffrey, Conor R., Camarda, Grazia, Carrasquilla, Manuela, Carter, Dee, Belen Cassera, Maria, Chih-Chien Cheng, Ken, Chindaudomsate, Worathad, Chubb, Anthony, Colon, Beatrice L., Colón-López, Daisy D., Corbett, Yolanda, Crowther, Gregory J., Cowan, Noemi, D’Alessandro, Sarah, Le Dang, Na, Delves, Michael, DeRisi, Joseph L., Du, Alan Y., Duffy, Sandra, Abd El-Salam El-Sayed, Shimaa, Ferdig, Michael T., Fernández Robledo, José A., Fidock, David A., Florent, Isabelle, Fokou, Patrick V. T., Galstian, Ani, Gamo, Francisco Javier, Gokool, Suzanne, Gold, Ben, Golub, Todd, Goldgof, Gregory M., Guha, Rajarshi, Guiguemde, W. Armand, Gural, Nil, Guy, R. Kiplin, Hansen, Michael A. E., Hanson, Kirsten K., Hemphill, Andrew, Hooft van Huijsduijnen, Rob, Horii, Takaaki, Horrocks, Paul, Hughes, Tyler B., Huston, Christopher, Igarashi, Ikuo, Ingram-Sieber, Katrin, Itoe, Maurice A., Jadhav, Ajit, Naranuntarat Jensen, Amornrat, Jensen, Laran T., Jiang, Rays H. Y., Kaiser, Annette, Keiser, Jennifer, Ketas, Thomas, Kicka, Sebastien, Kim, Sunyoung, Kirk, Kiaran, Kumar, Vidya P., Kyle, Dennis E., Lafuente, Maria Jose, Landfear, Scott, Lee, Nathan, Lee, Sukjun, Lehane, Adele M., Li, Fengwu, Little, David, Liu, Liqiong, Llinás, Manuel, Loza, Maria I., Lubar, Aristea, Lucantoni, Leonardo, Lucet, Isabelle, Maes, Louis, Mancama, Dalu, Mansour, Nuha R., March, Sandra, McGowan, Sheena, Medina Vera, Iset, Meister, Stephan, Mercer, Luke, Mestres, Jordi, Mfopa, Alvine N., Misra, Raj N., Moon, Seunghyun, Moore, John P., Morais Rodrigues da Costa, Francielly, Müller, Joachim, Muriana, Arantza, Nakazawa Hewitt, Stephen, Nare, Bakela, Nathan, Carl, Narraidoo, Nathalie, Nawaratna, Sujeevi, Ojo, Kayode K., Ortiz, Diana, Panic, Gordana, Papadatos, George, Parapini, Silvia, Patra, Kailash, Pham, Ngoc, Prats, Sarah, Plouffe, David M., Poulsen, Sally-Ann, Pradhan, Anupam, Quevedo, Celia, Quinn, Ronald J., Rice, Christopher A., Abdo Rizk, Mohamed, Ruecker, Andrea, St. Onge, Robert, Salgado Ferreira, Rafaela, Samra, Jasmeet, Robinett, Natalie G., Schlecht, Ulrich, Schmitt, Marjorie, Silva Villela, Filipe, Silvestrini, Francesco, Sinden, Robert, Smith, Dennis A., Soldati, Thierry, Spitzmüller, Andreas, Stamm, Serge Maximilian, Sullivan, David J., Sullivan, William, Suresh, Sundari, Suzuki, Brian M., Suzuki, Yo, Swamidass, S. Joshua, Taramelli, Donatella, Tchokouaha, Lauve R. Y., Theron, Anjo, Thomas, David, Tonissen, Kathryn F., Townson, Simon, Tripathi, Abhai K., Trofimov, Valentin, Udenze, Kenneth O., Ullah, Imran, Vallieres, Cindy, Vigil, Edgar, Vinetz, Joseph M., Voong Vinh, Phat, Vu, Hoan, Watanabe, Nao-aki, Weatherby, Kate, White, Pamela M., Wilks, Andrew F., Winzeler, Elizabeth A., Wojcik, Edward, Wree, Melanie, Wu, Wesley, Yokoyama, Naoaki, Zollo, Paul H. A., Abla, Nada, Blasco, Benjamin, Burrows, Jeremy, Laleu, Benoît, Leroy, Didier, Spangenberg, Thomas, Wells, Timothy, Willis, Paul A.

Orally Active Antischistosomal Early Leads Identified from the Open Access Malaria Box. (2014) Geary, Timothy G., Ingram-Sieber, Katrin, Cowan, Noemi, Panic, Gordana, Vargas, Mireille, Mansour, Nuha, Bickle, Quentin, Wells, Timothy N. C., Spangenberg, Thomas, Keiser, Jennifer

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Peak areas from the T695 phosphorylation. (2024) Koussis, Konstantinos, Haase, Silvia, Withers-Martinez, Chrislaine, Flynn, Helen R, Kunzelmann, Simone, Christodoulou, Evangelos, Ibrahim, Fairouz, Skehel, Mark, Baker, David A, Blackman, Michael J

Phosphoproteome analyses of PKG_GFP, PKG_T695A and PKG_T695E in P. falciparum schizonts. (2024) Koussis, Konstantinos, Haase, Silvia, Withers-Martinez, Chrislaine, Flynn, Helen R, Kunzelmann, Simone, Christodoulou, Evangelos, Ibrahim, Fairouz, Skehel, Mark, Baker, David A, Blackman, Michael J

Proteins identified from pull down experiments of WT, PKG_GFP, PKG_T695A and PKG_T695E. (2024) Koussis, Konstantinos, Haase, Silvia, Withers-Martinez, Chrislaine, Flynn, Helen R, Kunzelmann, Simone, Christodoulou, Evangelos, Ibrahim, Fairouz, Skehel, Mark, Baker, David A, Blackman, Michael J

Puerto Rico Insecticide Resistance Amplicons. (2024) London School of Hygiene and Tropical Medicine

Predicted epitopes in S. stercoralis proteins using BepiPred and bcepred. (2023) Marlais, Tegwen, Bickford-Smith, Jack, Talavera-López, Carlos, Le, Hai, Chowdhury, Fatima, Miles, Michael A.

Protein identity, features and gene expression levels of S. stercoralis orthologues of S. ratti E/S proteomic data. (2023) Marlais, Tegwen, Bickford-Smith, Jack, Talavera-López, Carlos, Le, Hai, Chowdhury, Fatima, Miles, Michael A.

PRJEB57331. (2022) London School of Hygiene & Tropical Medicine

PET scores for the catalysis study specimens. (2022) Meier, Stuart, Seddon, James A., Maasdorp, Elizna, Kleynhans, Léanie, du Plessis, Nelita, Loxton, Andre G., Malherbe, Stephanus T., Zak, Daniel E., Thompson, Ethan, Duffy, Fergal J., Kaufmann, Stefan H. E., Ottenhoff, Tom H. M., Scriba, Thomas J., Suliman, Sara, Sutherland, Jayne S., Winter, Jill, Kuivaniemi, Helena, Walzl, Gerhard, Tromp, Gerard

Plasmodium falciparum sequencing Bijagos Archipelago 2018. (2022) London School of Hygiene & Tropical Medicine

Polypolish: Short-read polishing of long-read bacterial genome assemblies. (2022) Wick, Ryan R., Holt, Kathryn E.

Plasmodium chabaudi genotype DK parasite stages during time series. (2021) Prior, Kimberley F., Middleton, Benita, Owolabi, Alíz T.Y., Westwood, Mary L., Holland, Jacob, O'Donnell, Aidan J., Blackman, Michael J., Skene, Debra J., Reece, Sarah E.

Plasmodium schizont densities in culture grown with and without isoleucine, as well as isoleucine starvation for different durations of time. (2021) Prior, Kimberley F., Middleton, Benita, Owolabi, Alíz T.Y., Westwood, Mary L., Holland, Jacob, O'Donnell, Aidan J., Blackman, Michael J., Skene, Debra J., Reece, Sarah E.

Plasmodium schizont proportion in culture grown with and without isoleucine. (2021) Prior, Kimberley F., Middleton, Benita, Owolabi, Alíz T.Y., Westwood, Mary L., Holland, Jacob, O'Donnell, Aidan J., Blackman, Michael J., Skene, Debra J., Reece, Sarah E.

projections: Project Future Case Incidence. (2020) Jombart, Thibaut, Nouvellet, Pierre, Bhatia, Sangeeta, Kamvar, Zhian N., Taylor, Tim, Ghozzi, Stephane

P.vivax whole genome sequencing. (2020) London School of Hygiene & Tropical Medicine

Pgp3 seroprevalence and associations with active trachoma and ocular Chlamydia trachomatis infection in Malawi: cross-sectional surveys in six evaluation units. (2019) Burr, Sarah E., Hart, John, Samikwa, Lyson, Chaima, David, Cooley, Gretchen, Martin, Diana, Masika, Michael, Solomon, Anthony W., Bailey, Robin L., Kalua, Khumbo

Plasmodium vivax morbidity after radical cure: A cohort study in Central Vietnam. (2019) Vinh Pham, Thanh, Van Nguyen, Hong, Rosas Aguirre, Angel, Van Nguyen, Van, Cleves, Mario A, Nguyen, Xa Xuan, Thanh Nguyen, Thao, Thanh Tran, Duong, Xuan Le, Hung, Hens, Niel, Rosanas-urgell, Anna, D’Alessandro, Umberto, Speybroeck, Niko, Erhart, Annette

Phosphodiesterase beta is the master regulator of cAMP signalling during malaria parasite invasion. (2019) Flueck, Christian, Drought, Laura G., Jones, Andrew, Patel, Avnish, Perrin, Abigail J., Walker, Eloise M., Nofal, Stephanie D., Snijders, Ambrosius P., Blackman, Michael J., Baker, David A.

Population genomics of hypervirulent Klebsiella pneumoniae clonal-group 23 reveals early emergence and rapid global dissemination. (2018) M. C. Lam, Margaret, Wyres, Kelly L., Duchêne, Sebastian, Wick, Ryan R., Judd, Louise M., Gan, Yunn-Hwen, Hoh, Chu-Han, Archuleta, Sophia, Molton, James S., Kalimuddin, Shirin, Koh, Tse Hsien, Passet, Virginie, Brisse, Sylvain, Holt, Kathryn E.

Profiling and validation of individual and patterns of Chlamydia trachomatis-specific antibody responses in trachomatous trichiasis. (2017) Pickering, Harry, Burr, Sarah E., Derrick, Tamsyn, Makalo, Pateh, Joof, Hassan, Hayward, Richard D., Holland, Martin J. description

Prevalence of Type VI Secretion System in Spanish Campylobacter jejuni Isolates. (2015) Ugarte-Ruiz, M, Stabler, Richard, Domínguez, L, Domínguez, L, Wren, Brendan, Dorrell, Nick, Gundogdu, Ozan

PBMC expression profiles of BCG vaccine protected infants and of BCG vaccinated infants who develop tuberculosis disease. (2014) Fletcher, Helen A., Filali-Mouhim, Ali, Nemes, Elisa, Hawkridge, Anthony, Keyser, Alana, Njikan, Samuel, Hatherill, Mark, Scriba, Thomas J., Abel, Brian, Kagina, Benjamin M., Veldsman, Ashley, Agudelo, Nancy Marín, Kaplan, Gilla, Hussey, Gregory D., Sekaly, Rafick-Pierre, Hanekom, Willem A.

Proteromonas lacertae. (2010) London School of Hygiene & Tropical Medicine

Proteromonas lacertae strain:LA. (2010) London School of Hygiene & Tropical Medicine

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Raw peak intensities of various lipid species measured before and after egress in RAP-treated (+RAP) and mock-treated (-RAP) LCAT:2loxPint parasites. (2023) Ramaprasad, Abhinay, Burda, Paul-Christian, Koussis, Konstantinos, Thomas, James A, Pietsch, Emma, Calvani, Enrica, Howell, Steven A, MacRae, James I, Snijders, Ambrosius P, Gilberger, Tim-Wolf, Blackman, Michael J

Regulatory function at the chromosome 10q24 leprosy association. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Replication of previously-published leprosy associated non-HLA SNPs in Malawi and Mali stratified by multibacillary and paucibacillary disease. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

RNAseq expression analysis of FACS-sorted macrophages from cxcr3.2 mutant and wt zebrafish larvae. (2021) Torraca, Vincenzo, Sommer, Frida, In 't Veld, Aliede E, Willemse, Joost, Meijer, Annemarie H

Raw data for both dizygotic and monozygotic twins from Y-tube olfactometer experiment. (2020) Fernández-Grandon, G. Mandela, Gezan, Salvador A., Armour, John A. L., Pickett, John A., Logan, James grid_on

Risk factor profiles and clinical outcomes for children and adults with pneumococcal infections in Singapore: A need to expand vaccination policy? S1 Dataset. (2019) Martinez-Vega, Rosario, Jauneikaite, Elita, Koh, Cheng Thoon, Hui, Ying Chua, Huishi Chua, Amanda, Khong, Wei Xin, Ban Hock, Tan, Guek Hong, Jenny Low, Venkatachalam, Indumathi, Anantharajah Tambyah, Paul, Hibberd, Martin L., Clarke, Stuart C., Oon Tek, Ng

Results of culture on different media from Laos and Cambodia by patient and sample type. (2019) Dance, David, Somsavanh, Sihalath, Rith, Kolthida, Sengdouangphachanh, Amphone, Luangraj, Manophab, Vongsouvath, Manivanh, Newton, Paul, Lubell, Yoel, Turner, Paul

Raw data for "Cross-laboratory evaluation of multiplex bead assays including independent common reference standards for immunological monitoring of observational and interventional human studies". (2018) van Meijgaarden, Krista E., Khatri, Bhagwati, Smith, Steven G., Drittij, Anne M. F. H., de Paus, Roelof A., Goeman, Jelle J., Ho, Mei M., Dockrell, Hazel M., McShane, Helen, Joosten, Simone A., Ottenhoff, Tom H. M.

Results of pathway enrichment analysis using Database for Annotation, Visualization and Integrated Discovery (DAVID). (2018) Roberts, Chrissy H., Ouburg, Sander, Preston, Mark D., de Vries, Henry J. C., Holland, Martin J., Morré, Servaas A.

Raw data for RBC, Hb and haematocrit from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. (2016) Lewin, Alex, Hamilton, Shea, Witkover, Aviva, Langford, Paul, Nicholas, Richard, Chataway, Jeremy, Bangham, Charles R.M.

Raw data for SELDI-TOF high range from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. (2016) Lewin, Alex, Hamilton, Shea, Witkover, Aviva, Langford, Paul, Nicholas, Richard, Chataway, Jeremy, Bangham, Charles R.M.

Raw data for SELDI-TOF low range from article: Free serum haemoglobin is associated with brain atrophy in secondary progressive multiple sclerosis. (2016) Lewin, Alex, Hamilton, Shea, Witkover, Aviva, Langford, Paul, Nicholas, Richard, Chataway, Jeremy, Bangham, Charles R.M.

Replication and Characterization of Association between ABO SNPs and Red Blood Cell Traits by Meta-Analysis in Europeans. (2016) McLachlan, Stela, Giambartolomei, Claudia, White, Jon, Charoen, Pimphen, Wong, Andrew, Finan, Chris, Engmann, Jorgen, Shah, Tina, Hersch, Micha, Podmore, Clara, Cavadino, Alana, Jefferis, Barbara J., Dale, Caroline E., Hypponen, Elina, Morris, Richard W., Casas, Juan P., Kumari, Meena, Ben-Shlomo, Yoav, Gaunt, Tom R., Drenos, Fotios, Langenberg, Claudia, Kuh, Diana, Kivimaki, Mika, Rueedi, Rico, Waeber, Gerard, Hingorani, Aroon D., Price, Jacqueline F., Walker, Ann P.

S

S. stercoralis genes (n = 328) differentially expressed in gut-dwelling (dark blue) versus non-gut-dwelling (light blue) life stages of the nematode with those containing predicted epitopes indicated. (2023) Marlais, Tegwen, Bickford-Smith, Jack, Talavera-López, Carlos, Le, Hai, Chowdhury, Fatima, Miles, Michael A.

SNP quality control summary in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Sample quality control summary in Malawi and Mali. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Selection signatures at chromosome 10q24. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Study populations and leprosy association statistics at rs2015583 in the Chinese replication analysis. (2022) Gilchrist, James J., Auckland, Kathryn, Parks, Tom, Mentzer, Alexander J., Goldblatt, Lily, Naranbhai, Vivek, Band, Gavin, Rockett, Kirk A., Toure, Ousmane B., Konate, Salimata, Sissoko, Sibiri, Djimdé, Abdoulaye A., Thera, Mahamadou A., Doumbo, Ogobara K., Sow, Samba, Floyd, Sian, Pönnighaus, Jörg M., Warndorff, David K., Crampin, Amelia C., Fine, Paul E. M., Fairfax, Benjamin P., Hill, Adrian V. S.

Supplementary information, CDC50 orthologues in Plasmodium falciparum have distinct roles in merozoite egress and trophozoite maturation. (2022) Patel, Avnish, Nofal, Stephanie D., Blackman, Michael J., Baker, David A.

Systemic but not local rehydration restores dehydration-induced changes in pulmonary function in healthy adults. (2020) Marshall, Hannah

Shigella sonnei infection of zebrafish reveals that O-antigen mediates neutrophil tolerance and dysentery incidence. (2019) Torraca, Vincenzo, Kaforou, Myrsini, Watson, Jayne, Duggan, Gina M., Guerrero-Gutierrez, Hazel, Krokowski, Sina, Hollinshead, Michael, Clarke, Thomas B., Mostowy, Rafal J., Tomlinson, Gillian S., Sancho-Shimizu, Vanessa, Clements, Abigail, Mostowy, Serge

Supplementary dataset for: "Shortening duration of ertapenem in outpatient parenteral antimicrobial therapy for complicated urinary tract infections: A retrospective study". (2019) Fink, Doug L, Collins, Steven, Barret, Ronnie, Pollara, Gabriele, Marks, Michael, Logan, Sarah

Semi-field evaluation of the cumulative effects of a “Lethal House Lure” on malaria mosquito mortality. (2019) Barreaux, Antoine M. G., Oumbouke, Welbeck, Zran Tia, Innocent, Brou, N’guessan, Koffi, Alphonsine A., N'guessan, Raphael, Thomas, Matthew B

Selective Whole Genome Amplification of Plasmodium malariae DNA from clinical samples reveals high genetic diversity and population structure of this neglected malaria parasite. (2019) London School of Hygiene & Tropical Medicine

S1 Data for: "A novel nutritional supplement to reduce plasma homocysteine in nonpregnant women: A randomised controlled trial in The Gambia". (2019) James, Philip, Jawla, Ousubie, Mohammed, Nuredin, Ceesay, Kabiru, Akemokwe, Fatai, Sonko, Bakary, Sise, Ebrima, Prentice, Andrew, Silver, Matt

Supporting data for 'High quality reference genomes for toxigenic and non-toxigenic Vibrio cholerae serogroup O139'. (2019) Dorman, Matthew J, Domman, Daryl, Uddin, Muhammad Ikhtear, Sharmin, Salma, Hassan Afrad, Mokibul, Begum, Yasmin Ara, Qadri, Firdausi, Thomson, Nicholas R

Spatial and temporal development of deltamethrin resistance in malaria vectors of the Anopheles gambiae complex from North Cameroon. (2019) Mandeng, Stanislas Elysée, Awono-Ambene, Herman Parfait, Bigoga, Jude D, Ekoko, Wolfgang Eyisap, Binyang, Jérome, Piameu, Michael, Mbakop, Lili Ranaise, Fesuh, Betrand Nono, Mvondo, Narcisse, Tabue, Raymond, Nwane, Philippe, Mimpfoundi, Rémy, Toto, Jean Claude, Kleinschmidt, Immo, Knox, Tessa Bellamy, Mnzava, Abraham Peter, Donnelly, Martin James, Fondjo, Etienne, Etang, Josiane

S1 Data for "Internet-accessed sexually transmitted infection (e-STI) testing and results service: A randomised, single-blind, controlled trial". (2017) Wilson, Emma, Free, Caroline, Morris, Tim P., Syred, Jonathan, Ahamed, Irrfan, Menon-Johansson, Anatole S., Palmer, Melissa J., Barnard, Sharmani, Rezel, Emma, Baraitser, Paula

Supplementary material from "Exploring the role of competition induced by non-vaccine serotypes for herd protection following pneumococcal vaccination". (2017) Masala, Giovanni, Lipsitch, M., Bottomley, Christian, Flasche, Stefan

Spatial dynamics and control of a crop pathogen with mixed-mode transmission. (2017) Mcquaid, Christopher Finn, van den Bosch, Frank, Szyniszewska, Anna, Alicai, Titus, Pariyo, Anthony, Chikoti, Patrick Chiza, Gilligan, Christopher Aidan

Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. (2017) Kallonen, Teemu, Brodrick, Hayley J., Harris, Simon R., Corander, Jukka, Brown, Nicholas M., Martin, Veronique, Peacock, Sharon J., Parkhill, Julian

Supplementary Data for: "The comparative immunology of wild and laboratory mice, Mus musculus domesticus". (2017) Abolins, Stephen, King, Elizabeth, Lazarou, Luke, Weldon, Laura, Hughes, Louise, Drescher, Paul, Raynes, John, Hafalla, Julius, Viney, Mark E., Riley, Eleanor

S1 Data for: "Absence of Association between Cord Specific Antibody Levels and Severe Respiratory Syncytial Virus (RSV) Disease in Early Infants: A Case Control Study from Coastal Kenya". (2016) Nyiro, Joyce Uchi, Sande, Charles Jumba, Mutunga, Martin, Kiyuka, Patience Kerubo, Munywoki, Patrick Kioo, Scott, John A. G., Nokes, David James

S1 Data for: "Is There a Need for Viral Load Testing to Assess Treatment Failure in HIV-Infected Patients Who Are about to Change to Tenofovir-Based First-Line Antiretroviral Therapy? Programmatic Findings from Myanmar". (2016) Thiha, Nay, Chinnakali, Palanivel, Harries, Anthony D., Shwe, Myint, Balathandan, Thanumalaya Perumal, Thein Than Tun, Sai, Das, Mrinalini, Tin, Htay Htay, Yi, Yi, Babin, François Xavier, Lwin, Thi Thi, Clevenbergh, Philippe Albert

Stimulating Influenza Vaccination via Prosocial Motives. S3 Dataset. (2016) Li, Meng, Taylor, Eric G., Atkins, Katherine E., Chapman, Gretchen B., Galvani, Alison P.

Sequence-Based Analysis Uncovers an Abundance of Non-Coding RNA in the Total Transcriptome of Mycobacterium tuberculosis. (2011) Arnvig, Kristine B., Comas, Iñaki, Thomson, Nicholas R., Houghton, Joanna, Boshoff, Helena I., Croucher, Nicholas J., Rose, Graham, Perkins, Timothy T., Parkhill, Julian, Dougan, Gordon, Young, Douglas B.

T

TnSEQ analysis measuring fitness costs of insertions in the M. bovis AF2122/97 genome during survival in extra-pulmonary lymph nodes. (2024) Scurlock, Matthew, Stiens, Jennifer, Passmore, Ian J., Nobeli, Irene, Kendall, Sharon

TBProfiler for automated calling of the association with drug resistance of variants in Mycobacterium tuberculosis. S1 File. (2022) Verboven, Lennert, Phelan, Jody, Heupink, Tim H., Van Rie, Annelies

TBProfiler for automated calling of the association with drug resistance of variants in Mycobacterium tuberculosis. S2 File. (2022) Verboven, Lennert, Phelan, Jody, Heupink, Tim H., Van Rie, Annelies

Targeted metabolomics on malaria-infected mouse blood. (2021) Prior, Kimberley F., Middleton, Benita, Owolabi, Alíz T.Y., Westwood, Mary L., Holland, Jacob, O'Donnell, Aidan J., Blackman, Michael J., Skene, Debra J., Reece, Sarah E.

Transcriptional remodeling during metacyclogenesis in Trypanosoma cruzi I. (2020) Cruz-Saavedra, Lissa, Vallejo, Gustavo A., Guhl, Felipe, Messenger, Louisa A., Ramírez, Juan David

TB WGS Tanzania. (2020) London School of Hygiene & Tropical Medicine

Transcriptional profiling unveils type I and II interferon networks in blood and tissues across diseases. (2019) Singhania, Akul, Graham, Christine M, Gabryšová, Leona, Moreira-Teixeira, Lúcia, Stavropoulos, Evangelos, Pitt, Jonathan M, Chakravarty, Probir, Warnatsch, Annika, Branchett, William J, Conejero, Laura, Lin, Jing-Wen, Davidson, Sophia, Wilson, Mark S, Bancroft, Gregory, Langhorne, Jean, Frickel, Eva, Sesay, Abdul K, Priestnall, Simon L, Herbert, Eleanor, Ioannou, Marianna, Wang, Qian, Humphreys, Ian R, Dodd, Jonathan, Openshaw, Peter JM, Mayer-Barber, Katrin D, Jankovic, Dragana, Sher, Alan, Lloyd, Clare M, Baldwin, Nicole, Chaussabel, Damien, Papayannopoulos, Venizelos, Wack, Andreas, Banchereau, Jacques F

Transgenic P. knowlesi orthologue replacement lines provide surrogates for P. vivax vaccine development and Duffy Binding Protein tropism studies. (2019) London School of Hygiene & Tropical Medicine

Targeted maximum likelihood estimation for a binary treatment: A tutorial. (2018) Fernandez, Miguel Angel Luque, Schomaker, Michael, Rachet, Bernard, Schnitzer, Mireille E.

The ecology of immune state in a wild mammal, Mus musculus domesticus. (2018) Abolins, Stephen, Lazarou, Luke, Weldon, Laura, Hughes, Louise, King, Elizabeth C., Drescher, Paul, Pocock, Michael J. O., Hafalla, Julius C. R., Riley, Eleanor M., Viney, Mark

The ecology of immune state in a wild mammal, Mus musculus domesticus. (2018) Abolins, Stephen, Lazarou, Luke, Weldon, Laura, Hughes, Louise, King, Elizabeth C., Drescher, Paul, Pocock, Michael J. O., Hafalla, Julius C. R., Riley, Eleanor M., Viney, Mark

Time course RNA-seq of Mycobacterium tuberculosis exposed to nitric oxide. (2017) Cortes, Teresa, Schubert, Olga T., Banaei-Esfahani, Amir, Collins, Ben C., Aebersold, Ruedi, Young, Douglas B.

The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission. (2017) Ruis, Christopher, Roy, Sunando, Brown, Julianne R., Allen, David J., Goldstein, Richard A., Breuer, Judith

The mediation of coronary calcification in the association between risk scores and cardiac troponin T elevation in healthy adults: Is atherosclerosis a good prognostic precursor of coronary disease? (2015) Lazzarino, Antonio, Hamer, Mark, Carvalho, Livia, Gaze, David, Collinson, Paul, Steptoe, Andrew description

Transcriptome data for bacterial and fungal keratitis compared to cadaver cornea. (2014) Chidambaram, Jaya D., Bauer, Julien, Holland, Martin, Burton, Matthew, Prajna, Namperumalsamy V, Srikanthi, Palepu, Lalitha, Prajna, Elakkiya, Shanmugam, Lanjewar, Shruti

Transcript abundance comparison between BALB/c ears inoculated with Leishmania mexicana and Leishmania mexicana plus promastigote secretory gel (PSG). (2014) Giraud, Emilie, Rogers, Matthew, Bates, Paul, Dillon, Rod

Transcription profiling by array of Caenorhabditis elegans with biofilm compared to without biofilm. (2014) Joshua, Gwp

Transcription profiling of Burkholderia pseudomallei under salt stress and the effect on a type III secretion system. (2014) Pumirat, Pornpan, Cuccui, Jon, Stabler, Richard, Stevens, Joanne M, Muangsombut, Veerachat, Singsuksawat, Ekapot, Stevens, Mark P, Wren, Brendan, Korbsrisate, Sunee

Transcription profiling of brain, liver and spleen from rats infected with Escherichia coli K1 and treated with capsule-selective endosialidase E. (2014) Zelmer, Andrea, Martin, Melissa, Gundogdu, Ozan, Birchenough, George, Lever, Rebecca, Wren, Brendan, Luzio, J. Paul, Taylor, Peter W.

Therapy code list - Other immunosuppressive therapies codes. (2014) Forbes, Harriet, Bhaskaran, Krishnan, Thomas, Sara L, Smeeth, Liam, Clayton, Tim, Langan, Sinead description

The Condition-Dependent Transcriptional Landscape of Burkholderia pseudomallei. (2013) Fong Ooi, Wen, Ong, Catherine, Nandi, Tannistha, Kreisberg, Jason F, Hoon Chua, Hui, Sun, Guangwen, Chen, Yahua, Mueller, Claudia, Conejero, Laura, Eshaghi, Majid, Moh Lik Ang, Roy, Liu, Jianhua, Sobral, Bruno W, Korbsrisate, Sunee, Hwen Gan, Yunn, Titball, Richard W, Bancroft, Gregory, Valade, Eric, Tan, Patrick

Tuberculosis Patients Blood Gene Expression Through Treatment. (2012) Cliff, Jackie, Lee, Ji-Sook, Constantinou, Nicholas, Cho, Jang-Eun, Clark, Taane G., Ronacher, Katharina, King, Elizabeth C., Lukey, Pauline T., Duncan, Ken, Van Helden, Paul D., Walzl, Gerhard, Dockrell, Hazel M.

Tuberculosis Patients Blood Gene Expression Through Treatment (cured and end-of-treatment patients). (2012) Cliff, Jackie, Lee, Ji-Sook, Constantinou, Nicholas, Cho, Jang-Eun, Clark, Taane G., Ronacher, Katharina, King, Elizabeth C., Lukey, Pauline T., Duncan, Ken, Van Helden, Paul D., Walzl, Gerhard, Dockrell, Hazel M.

The conjunctival transcriptome in scarring trachoma for Tanzanians. (2011) Burton, Matthew J., Hu, V, Bauer, J, Mabey, David, Holland, Martin J., Bailey, Robin L.

U

Use of novel lab assays to examine the effect of pyrethroid-treated bed nets on blood-feeding success and longevity of highly insecticide-resistant Anopheles gambiae s.l. mosquitoes. (2022) Barreaux, Priscille, Koella, Jacob C., N'Guessan, Raphael, Thomas, Matthew B.

Using Observational Data to Estimate the Effect of Hand Washing and Clean Delivery Kit Use by Birth Attendants on Maternal Deaths after Home Deliveries in Rural Bangladesh, India and Nepal. (2015) Seward, Nadine, Prost, Andrew, Copas, Andrew, Corbin, Marine, Li, Leah, Colbourn, Tim, Osrin, David, Neuman, Melissa, Azad, Kishwar, Kuddus, Abdul, Nair, Nirmala, Tripathy, Prasanta, Manandhar, Dharma, Costello, Anthony, Cortina-Borja, Mario

V

Vitamin D status and risk of incident tuberculosis disease: A nested case-control study, systematic review, and individual-participant data meta-analysis. (2019) Aibana, Omowunmi, Huang, Chuan-Chin, Aboud, Said, Arnedo-Pena, Alberto, Becerra, Mercedes C, Bellido-Blasco, Juan Bautista, Bhosale, Ramesh, Calderon, Roger, Chiang, Silvia, Contreras, Carmen, Davaasambuu, Ganmaa, Fawzi, Wafaie W, Franke, Molly F., Galea, Jerome T., Garcia-Ferrer, Daniel, Gil-Fortuño, Maria, Gomila-Sard, Barbará, Gupta, Amita, Gupte, Nikhil, Hussain, Rabia, Iborra-Millet, Jesus, Iqbal, Najeeha T., Juan-Cerdán, Jose Vicente, Kinikar, Aarti, Lecca, Leonid, Mave, Vidya, Meseguer-Ferrer, Noemi, Montepiedra, Grace, Mugusi, Ferdinand M., Owolabi, Olumuyiwa, Parsonnet, Julie, Roach-Poblete, Freddy, Romeu-García, Maria Angeles, Spector, Stephen A., Sudfeld, Christopher R., Tenforde, Mark W., Togun, Toyin, Yataco, Rosa, Zhang, Zibiao, Murray, Megan B.

W

Wolbachia endosymbionts in two Anopheles species indicates independent acquisitions and lack of prophage elements. (2022) Quek, Shannon, Cerdeira, Louise, Jeffries, Claire L., Tomlinson, Sean, Walker, Thomas, Hughes, Grant L., Heinz, Eva

Whole genome sequencing of Mycobacterium tuberculosis strains resistant to D-cycloserine. (2018) Cortes, Teresa, Carvalho, Luiz

Whole genome sequences for M.tuberculosis isolates from the TDR strain bank. (2015) Phelan, Jody, Coll, Francesc, Mcnerney, Ruth, Ascher, David B., Pires, Douglas E. V., Furnham, Nick, Coeck, Nele, Hill-Cawthorne, Grant A., Nair, Mridul B., Mallard, Kim, Ramsay, Andrew, Campino, Susana, Hibberd, Martin, Pain, Arnab, Rigouts, Leen, Clark, Taane description